CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019151.1-P	Field mustard	cytosol	60.56	100.0
CDX94438	Canola	cytosol	58.69	96.9
CDY52365	Canola	cytosol	57.75	95.35
CDX89411	Canola	cytosol	57.75	95.35
CDX92721	Canola	mitochondrion	78.87	93.85
AT4G25590.1	Thale cress	cytosol	58.69	91.24
CDY31909	Canola	cytosol	54.93	90.0
CDY32581	Canola	cytosol	22.54	88.89
CDY54088	Canola	cytosol	38.5	84.54
PGSC0003DMT400037205	Potato	cytosol	53.52	83.21
Solyc03g025750.2.1	Tomato	cytosol	53.05	82.48
KRH35309	Soybean	cytosol	52.58	81.75
KRG91521	Soybean	cytosol	52.58	81.75
GSMUA_Achr4P29400_001	Banana	cytosol	36.62	79.59
CDY72027	Canola	cytosol	39.44	78.5
CDY31586	Canola	cytosol	45.54	73.48
CDX90057	Canola	cytosol	45.54	72.93
CDX88730	Canola	cytosol	50.23	69.48
CDY15154	Canola	cytosol	48.83	69.33
CDX71067	Canola	cytosol	42.72	68.94
CDX71068	Canola	cytosol	50.7	65.85
CDY09242	Canola	cytosol	46.01	64.05
CDY38025	Canola	cytosol	49.77	60.23
CDX99133	Canola	cytosol, plastid	46.95	59.88
CDX86048	Canola	cytosol, plastid	46.48	59.28
CDY24750	Canola	cytosol	39.91	58.22
CDY10786	Canola	cytosol	38.5	56.16
CDX89737	Canola	cytosol	35.68	53.15
CDX75477	Canola	cytosol	29.58	52.07
CDY02247	Canola	cytosol	34.74	51.75
CDY40654	Canola	cytosol	29.58	51.22
CDY02249	Canola	cytosol	15.49	50.77
CDX88731	Canola	cytosol, plastid	46.01	49.25
CDX72508	Canola	cytosol	31.46	48.91
CDX69101	Canola	cytosol	32.39	48.59
CDX80216	Canola	cytosol	48.83	41.27
CDY07204	Canola	cytosol	47.42	37.27
CDY51146	Canola	cytosol, mitochondrion	49.3	29.83

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	GO:A0A078ILH9	UniProt:A0A078ILH9	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	EnsemblPlants:CDY50194	ProteinID:CDY50194	ProteinID:CDY50194.1	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSBRNA2T00096127001
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF33
SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI0004EDB2E2	:	:	:

Description

BnaA03g47540DBnaA03g47540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILH9]

Coordinates

chrLK032888:+:66333..68297

Molecular Weight (calculated)

24634.5 Da

IEP (calculated)

8.858

GRAVY (calculated)

-0.485

Length

213 amino acids

Sequence
(BLAST)

001: MDGLECKQIA AKNRTEKPLF VRVCLDPFFT KPIKHYPPKL HSSFFPSCAR RQSIFTQEKK TNLCSSSLTV ETEQKQWFAN AASGMAVEDN CKLKFLELKK
101: RTYRFIIFRI DGQQVVVEKL GNPQETYDDF TNSLPADECR YAVFDLDFTT NENCQKSKIF FIAWSPDSSR VRMKMVYASS KDRFKRSLDG IQVELQATDP
201: SEMSFDIVKS RAL

Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)

001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.