CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028304.1-P	Field mustard	cytosol	99.23	99.23
CDY32581	Canola	cytosol	38.46	92.59
CDY52365	Canola	cytosol	91.54	92.25
CDX94438	Canola	cytosol	91.54	92.25
CDX89411	Canola	cytosol	90.77	91.47
PGSC0003DMT400037205	Potato	cytosol	87.69	83.21
KRG91521	Soybean	cytosol	86.15	81.75
KRH35309	Soybean	cytosol	86.15	81.75
Solyc03g025750.2.1	Tomato	cytosol	85.38	81.02
GSMUA_Achr4P29400_001	Banana	cytosol	60.77	80.61
CDY54088	Canola	cytosol	56.92	76.29
CDX90057	Canola	cytosol	76.92	75.19
CDY31586	Canola	cytosol	74.62	73.48
CDY72027	Canola	cytosol	56.92	69.16
CDX71067	Canola	cytosol	70.0	68.94
CDY15154	Canola	cytosol	76.92	66.67
CDX92721	Canola	mitochondrion	90.0	65.36
CDX88730	Canola	cytosol	76.92	64.94
CDX71068	Canola	cytosol	76.92	60.98
CDY09242	Canola	cytosol	70.0	59.48
CDY38025	Canola	cytosol	78.46	57.95
CDX99133	Canola	cytosol, plastid	72.31	56.29
CDY24750	Canola	cytosol	63.08	56.16
CDX86048	Canola	cytosol, plastid	71.54	55.69
CDY50194	Canola	cytosol	90.0	54.93
CDY10786	Canola	cytosol	60.77	54.11
CDX89737	Canola	cytosol	57.69	52.45
CDY02249	Canola	cytosol	26.15	52.31
CDX75477	Canola	cytosol	48.46	52.07
CDY02247	Canola	cytosol	56.92	51.75
CDY40654	Canola	cytosol	48.46	51.22
CDX72508	Canola	cytosol	51.54	48.91
CDX69101	Canola	cytosol	51.54	47.18
CDX88731	Canola	cytosol, plastid	70.0	45.73
CDX80216	Canola	cytosol	74.62	38.49
CDY07204	Canola	cytosol	76.15	36.53
CDY51146	Canola	cytosol, mitochondrion	75.38	27.84

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	GO:A0A078H3C3	UniProt:A0A078H3C3	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf
InterPro:ADF/Cofilin	EnsemblPlants:CDY31909	ProteinID:CDY31909	ProteinID:CDY31909.1	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSBRNA2T00050662001
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF33
SMART:SM00102	SUPFAM:SSF55753	UniParc:UPI0004EEFA4F	:	:	:

Description

BnaC09g28350DBnaC09g28350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3C3]

Coordinates

chrLK032282:+:75877..76957

Molecular Weight (calculated)

15191.0 Da

IEP (calculated)

5.018

GRAVY (calculated)

-0.466

Length

130 amino acids

Sequence
(BLAST)

001: MAVEDECKIK FLELKSKRNY RFIIFRIDGQ QVVVEKLGSP EENYDDFSNS LPANECRYAV FDFDFTTAEN CQKSKIFFIA WSPDSSRVRM KMVYASSKDR
101: FKRELDGIQV ELQATDPSEM SFDIIKSRAL

Best Arabidopsis Sequence Match ( AT5G52360.1 )
(BLAST)

001: MANAASGMAV EDECKLKFLE LKAKRNYRFI IFRIDGQQVV VEKLGSPQEN YDDFTNYLPP NECRYAVYDF DFTTAENIQK SKIFFIAWSP DSSRVRMKMV
101: YASSKDRFKR ELDGIQVELQ ATDPSEMSLD IIKSRAL

Arabidopsis Description

ADF12ADF10 [Source:UniProtKB/TrEMBL;Acc:A0A178UBW2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.