Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86048 | Canola | cytosol, plastid | 98.8 | 98.8 |
| Bra038266.1-P | Field mustard | cytosol | 98.2 | 98.2 |
| CDY31586 | Canola | cytosol | 68.26 | 86.36 |
| KRH19714 | Soybean | nucleus | 71.86 | 86.33 |
| AT3G46000.2 | Thale cress | cytosol | 80.24 | 85.9 |
| CDX71067 | Canola | cytosol | 67.66 | 85.61 |
| GSMUA_Achr10P... | Banana | cytosol | 65.27 | 82.58 |
| KRH11708 | Soybean | mitochondrion | 67.66 | 81.3 |
| KRH32309 | Soybean | cytosol, nucleus | 70.06 | 81.25 |
| Os05t0113400-01 | Rice | cytosol, extracellular, plastid | 67.07 | 81.16 |
| KRH36708 | Soybean | mitochondrion | 67.07 | 80.58 |
| GSMUA_Achr6P15320_001 | Banana | cytosol | 63.47 | 80.3 |
| Solyc06g005360.2.1 | Tomato | cytosol, extracellular, nucleus | 65.87 | 80.29 |
| PGSC0003DMT400008913 | Potato | cytosol | 65.87 | 80.29 |
| HORVU0Hr1G000200.1 | Barley | cytosol | 65.87 | 79.14 |
| CDY09242 | Canola | cytosol | 72.46 | 79.08 |
| CDX88730 | Canola | cytosol | 72.46 | 78.57 |
| EER95084 | Sorghum | cytosol | 65.27 | 78.42 |
| EES17589 | Sorghum | cytosol | 64.67 | 77.7 |
| Zm00001d035629_P001 | Maize | cytosol | 62.28 | 74.82 |
| CDX71068 | Canola | cytosol | 73.05 | 74.39 |
| Zm00001d035625_P001 | Maize | cytosol | 58.08 | 74.05 |
| CDX94438 | Canola | cytosol | 56.89 | 73.64 |
| CDY52365 | Canola | cytosol | 56.89 | 73.64 |
| CDX89411 | Canola | cytosol | 56.89 | 73.64 |
| CDY31909 | Canola | cytosol | 56.29 | 72.31 |
| CDX90057 | Canola | cytosol | 56.29 | 70.68 |
| CDY32581 | Canola | cytosol | 22.75 | 70.37 |
| GSMUA_Achr9P04050_001 | Banana | endoplasmic reticulum, extracellular | 68.26 | 68.67 |
| GSMUA_Achr6P33310_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 67.66 | 68.07 |
| AT3G45990.1 | Thale cress | cytosol | 53.29 | 66.92 |
| CDY15154 | Canola | cytosol | 59.88 | 66.67 |
| CDY54088 | Canola | cytosol | 37.13 | 63.92 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 70.06 | 63.24 |
| CDY72027 | Canola | cytosol | 40.12 | 62.62 |
| VIT_08s0040g03360.t01 | Wine grape | plastid | 70.06 | 61.9 |
| CDY24750 | Canola | cytosol | 53.29 | 60.96 |
| CDY10786 | Canola | cytosol | 52.69 | 60.27 |
| CDX88731 | Canola | cytosol, plastid | 71.26 | 59.8 |
| VIT_11s0103g00260.t01 | Wine grape | cytosol | 41.92 | 59.32 |
| CDY38025 | Canola | cytosol | 59.88 | 56.82 |
| VIT_10s0092g00330.t01 | Wine grape | cytosol | 30.54 | 56.04 |
| CDX92721 | Canola | mitochondrion | 59.88 | 55.87 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 71.26 | 54.84 |
| CDX75477 | Canola | cytosol | 38.92 | 53.72 |
| CDY40654 | Canola | cytosol | 38.92 | 52.85 |
| CDX69101 | Canola | cytosol | 43.11 | 50.7 |
| CDY02247 | Canola | cytosol | 42.52 | 49.65 |
| CDX89737 | Canola | cytosol | 42.52 | 49.65 |
| CDX72508 | Canola | cytosol | 40.72 | 49.63 |
| CDX80216 | Canola | cytosol | 73.05 | 48.41 |
| CDY50194 | Canola | cytosol | 59.88 | 46.95 |
| CDY02249 | Canola | cytosol | 17.37 | 44.62 |
| GSMUA_Achr2P16220_001 | Banana | cytosol | 69.46 | 41.73 |
| CDY07204 | Canola | cytosol | 59.28 | 36.53 |
| CDY51146 | Canola | cytosol, mitochondrion | 58.68 | 27.84 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | GO:A0A078EIH9 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin |
| EnsemblPlants:CDX99133 | ProteinID:CDX99133 | ProteinID:CDX99133.1 | GO:GO:0003674 | GO:GO:0003779 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 | EnsemblPlantsGene:GSBRNA2T00107291001 | InterPro:IPR002108 |
| InterPro:IPR029006 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF33 | SMART:SM00102 |
| SUPFAM:SSF55753 | UniParc:UPI0004EDFFB8 | : | : | : | : |
Description
BnaA06g18240D
Coordinates
chrLK031908:+:604075..605436
Molecular Weight (calculated)
19159.6 Da
IEP (calculated)
4.685
GRAVY (calculated)
-0.376
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSQSSSFY CFKVVRYDID FACGIESESV LANAASGMAV HDDCKLKFLE LKAKRTFRTI VYKIEDKQVI VEKLGEPEQS YDDFAASLPD NECRYAIYDF
101: DFVTEENCQK SKIFFIAWSP DTAKVRDKMI YASSKDRFKR ELDGIQVELQ ATDPTEMGLD VFKSRTN
101: DFVTEENCQK SKIFFIAWSP DTAKVRDKMI YASSKDRFKR ELDGIQVELQ ATDPTEMGLD VFKSRTN
001: MANAASGMAV HDDCKLKFME LKAKRTFRTI VYKIEDKQVI VEKLGEPEQS YDDFAASLPA DDCRYCIYDF DFVTAENCQK SKIFFIAWSP DTAKVRDKMI
101: YASSKDRFKR ELDGIQVELQ ATDPTEMGLD VFKSRTN
101: YASSKDRFKR ELDGIQVELQ ATDPTEMGLD VFKSRTN
Arabidopsis Description
ADF2Actin depolymerizing factor 2 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.