Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 3
- endoplasmic reticulum 5
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P15320_001 | Banana | cytosol | 57.14 | 93.94 |
| GSMUA_Achr10P... | Banana | cytosol | 54.84 | 90.15 |
| Os05t0113400-01 | Rice | cytosol, extracellular, plastid | 55.3 | 86.96 |
| KRH19714 | Soybean | nucleus | 55.3 | 86.33 |
| VIT_13s0019g00550.t01 | Wine grape | cytosol | 53.92 | 84.17 |
| GSMUA_Achr8P11370_001 | Banana | cytosol | 42.86 | 83.78 |
| HORVU0Hr1G000200.1 | Barley | cytosol | 53.0 | 82.73 |
| AT5G59890.1 | Thale cress | cytosol | 53.0 | 82.73 |
| EES17589 | Sorghum | cytosol | 53.0 | 82.73 |
| PGSC0003DMT400023061 | Potato | cytosol | 53.0 | 82.73 |
| Solyc09g010440.2.1 | Tomato | plastid | 53.0 | 82.73 |
| Solyc10g084660.1.1 | Tomato | cytosol, extracellular | 52.53 | 82.01 |
| Solyc04g011370.2.1 | Tomato | extracellular | 53.46 | 81.12 |
| CDX71067 | Canola | cytosol | 49.31 | 81.06 |
| CDY31586 | Canola | cytosol | 49.31 | 81.06 |
| Bra006686.1-P | Field mustard | cytosol | 49.31 | 81.06 |
| PGSC0003DMT400028567 | Potato | cytosol | 51.61 | 80.58 |
| KRH11708 | Soybean | mitochondrion | 51.61 | 80.58 |
| Bra002522.1-P | Field mustard | cytosol | 51.61 | 80.58 |
| KRH32309 | Soybean | cytosol, nucleus | 53.46 | 80.56 |
| PGSC0003DMT400071339 | Potato | cytosol | 53.0 | 80.42 |
| KRH36708 | Soybean | mitochondrion | 51.15 | 79.86 |
| Zm00001d035629_P001 | Maize | cytosol | 51.15 | 79.86 |
| PGSC0003DMT400087280 | Potato | cytosol | 49.77 | 79.41 |
| GSMUA_AchrUn_... | Banana | cytosol | 47.93 | 78.79 |
| Zm00001d035625_P001 | Maize | cytosol | 47.47 | 78.63 |
| GSMUA_Achr11P... | Banana | cytosol | 47.47 | 78.03 |
| GSMUA_Achr11P... | Banana | cytosol | 47.47 | 78.03 |
| Bra020277.1-P | Field mustard | cytosol | 53.46 | 77.85 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 65.9 | 77.3 |
| GSMUA_Achr1P00290_001 | Banana | cytosol | 47.0 | 77.27 |
| Solyc06g005360.2.1 | Tomato | cytosol, extracellular, nucleus | 48.39 | 76.64 |
| PGSC0003DMT400008913 | Potato | cytosol | 48.39 | 76.64 |
| CDX88730 | Canola | cytosol | 53.92 | 75.97 |
| Bra006687.1-P | Field mustard | cytosol | 53.46 | 75.82 |
| AT5G59880.1 | Thale cress | cytosol | 48.39 | 75.54 |
| AT3G46010.2 | Thale cress | cytosol | 52.07 | 75.33 |
| VIT_06s0004g04280.t01 | Wine grape | cytosol | 58.06 | 75.0 |
| GSMUA_Achr6P33310_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 57.14 | 74.7 |
| CDY09242 | Canola | cytosol | 52.53 | 74.51 |
| AT3G46000.2 | Thale cress | cytosol | 53.46 | 74.36 |
| GSMUA_Achr9P04050_001 | Banana | endoplasmic reticulum, extracellular | 56.68 | 74.1 |
| Bra020276.1-P | Field mustard | cytosol | 52.07 | 73.86 |
| GSMUA_Achr4P29400_001 | Banana | cytosol | 33.18 | 73.47 |
| CDX99133 | Canola | cytosol, plastid | 54.84 | 71.26 |
| Bra038266.1-P | Field mustard | cytosol | 54.84 | 71.26 |
| CDX71068 | Canola | cytosol | 53.46 | 70.73 |
| CDX86048 | Canola | cytosol, plastid | 54.38 | 70.66 |
| GSMUA_Achr5P24750_001 | Banana | cytosol | 35.48 | 69.37 |
| GSMUA_Achr7P00900_001 | Banana | cytosol | 41.01 | 67.42 |
| GSMUA_Achr2P13120_001 | Banana | cytosol | 44.7 | 66.9 |
| VIT_08s0040g03360.t01 | Wine grape | plastid | 57.6 | 66.14 |
| GSMUA_Achr7P16650_001 | Banana | cytosol | 28.57 | 64.58 |
| GSMUA_Achr6P15330_001 | Banana | cytosol, plastid | 26.73 | 64.44 |
| GSMUA_Achr2P17320_001 | Banana | cytosol | 42.4 | 63.45 |
| CDX88731 | Canola | cytosol, plastid | 55.76 | 60.8 |
| VIT_11s0103g00260.t01 | Wine grape | cytosol | 32.72 | 60.17 |
| AT3G45990.1 | Thale cress | cytosol | 36.41 | 59.4 |
| GSMUA_Achr5P12270_001 | Banana | plastid, vacuole | 52.53 | 56.72 |
| VIT_10s0092g00330.t01 | Wine grape | cytosol | 23.5 | 56.04 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 35.48 | 53.85 |
| GSMUA_Achr5P18890_001 | Banana | cytosol, plastid | 34.56 | 52.45 |
| GSMUA_Achr2P16220_001 | Banana | cytosol | 66.82 | 52.16 |
| GSMUA_Achr2P18590_001 | Banana | cytosol | 52.53 | 50.22 |
| GSMUA_Achr1P09160_001 | Banana | cytosol | 44.24 | 49.23 |
| GSMUA_Achr2P11510_001 | Banana | cytosol | 50.69 | 48.25 |
| CDX80216 | Canola | cytosol | 55.3 | 47.62 |
| GSMUA_Achr11P... | Banana | cytosol | 35.02 | 44.97 |
| GSMUA_AchrUn_... | Banana | extracellular | 15.67 | 39.08 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf | InterPro:ADF/Cofilin | GO:GO:0003674 |
| GO:GO:0003779 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005856 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0030042 | EnsemblPlantsGene:GSMUA_Achr10G13570_001 | EnsemblPlants:GSMUA_Achr10P13570_001 | EnsemblPlants:GSMUA_Achr10T13570_001 | InterPro:IPR002108 |
| InterPro:IPR029006 | UniProt:M0RHY3 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF30 |
| SMART:SM00102 | SUPFAM:SSF55753 | TMHMM:TMhelix | UniParc:UPI0002967ABF | SEG:seg | : |
Description
Actin-depolymerizing factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G13570_001]
Coordinates
chr10:+:22158492..22160402
Molecular Weight (calculated)
25568.0 Da
IEP (calculated)
6.500
GRAVY (calculated)
0.024
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWILFYCSD ARLDFVYLIS LFIYTRIILN RWGLGLSFPS FFSSYFCHHN IDRFMACFID LTRCHEFIML MLLIYCLWHA NAASGMAVND DCKLKFLELK
101: AKRTYRFIVF KIDEKLKQVI VETLGEPNLT YDDFTASLPT NECRYAIYDF DFVTEENCQK SKIFFIAWSP DTARVRSKML YASSKDRFKR ELDGIQVELQ
201: ATDPTEMGLD VIRGRAN
101: AKRTYRFIVF KIDEKLKQVI VETLGEPNLT YDDFTASLPT NECRYAIYDF DFVTEENCQK SKIFFIAWSP DTARVRSKML YASSKDRFKR ELDGIQVELQ
201: ATDPTEMGLD VIRGRAN
001: MTTCVCVCVV QANSASGMHV NDECKIKFLE LKAKRTYRFI VFKIDEKAQQ VQIEKLGNPE ETYDDFTSSI PDDECRYAVY DFDFTTEDNC QKSKIFFIAW
101: SPDTSRVRSK MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL
101: SPDTSRVRSK MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL
Arabidopsis Description
ADF8actin depolymerizing factor 8 [Source:TAIR;Acc:AT4G00680]
SUBAcon: [extracellular,cytosol]
SUBAcon: [extracellular,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.