Factsheet for GSMUA_Achr5P18890_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, plastid	93.01	93.01
Zm00001d028392_P001	Maize	cytosol	81.12	81.12
GSMUA_Achr11P...	Banana	cytosol	94.41	79.88
HORVU4Hr1G063830.6	Barley	cytosol	79.72	79.72
KRH24296	Soybean	cytosol, plastid	79.72	79.72
Bra013058.1-P	Field mustard	cytosol	79.72	79.72
Os03t0243100-01	Rice	cytosol	79.72	79.72
CDY02247	Canola	cytosol	79.72	79.72
KRH29274	Soybean	cytosol	73.43	79.55
CDX89737	Canola	cytosol	79.02	79.02
TraesCS4D01G228100.1	Wheat	cytosol	79.02	79.02
TraesCS4A01G071400.1	Wheat	cytosol	78.32	78.32
TraesCS4B01G227300.1	Wheat	cytosol	78.32	78.32
AT2G16700.1	Thale cress	cytosol	77.62	77.62
VIT_03s0038g02220.t01	Wine grape	cytosol	71.33	77.27
Solyc01g111380.2.1	Tomato	cytosol, plastid	76.92	76.92
PGSC0003DMT400015865	Potato	cytosol	76.92	76.92
KRH51402	Soybean	cytosol	76.22	76.22
CDX75477	Canola	cytosol	63.64	75.21
AT4G34970.1	Thale cress	cytosol	72.03	73.05
CDY40654	Canola	cytosol	62.24	72.36
Bra017683.1-P	Field mustard	cytosol	67.83	71.85
CDX69101	Canola	cytosol	70.63	71.13
Bra011575.1-P	Field mustard	cytosol	70.63	71.13
CDX72508	Canola	cytosol	66.43	69.34
Zm00001d047942_P001	Maize	mitochondrion	80.42	66.86
GSMUA_Achr4P29400_001	Banana	cytosol	43.36	63.27
GSMUA_Achr8P11370_001	Banana	cytosol	44.76	57.66
GSMUA_Achr11P...	Banana	cytosol	53.15	57.58
GSMUA_Achr10P...	Banana	cytosol	52.45	56.82
GSMUA_Achr7P00900_001	Banana	cytosol	52.45	56.82
OQU92928	Sorghum	cytosol, plastid	80.42	56.37
GSMUA_AchrUn_...	Banana	cytosol	51.75	56.06
GSMUA_Achr5P24750_001	Banana	cytosol	43.36	55.86
GSMUA_Achr11P...	Banana	cytosol	51.05	55.3
GSMUA_Achr1P00290_001	Banana	cytosol	50.35	54.55
GSMUA_Achr6P15320_001	Banana	cytosol	48.95	53.03
GSMUA_Achr2P13120_001	Banana	cytosol	53.15	52.41
GSMUA_Achr2P17320_001	Banana	cytosol	52.45	51.72
GSMUA_Achr7P16650_001	Banana	cytosol	33.57	50.0
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	56.64	48.8
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	56.64	48.8
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	57.34	44.32
GSMUA_Achr6P15330_001	Banana	cytosol, plastid	27.27	43.33
GSMUA_Achr1P09160_001	Banana	cytosol	57.34	42.05
GSMUA_Achr5P12270_001	Banana	plastid, vacuole	55.24	39.3
GSMUA_Achr2P11510_001	Banana	cytosol	55.94	35.09
GSMUA_Achr10P...	Banana	endoplasmic reticulum	52.45	34.56
GSMUA_Achr2P18590_001	Banana	cytosol	53.15	33.48
GSMUA_AchrUn_...	Banana	extracellular	19.58	32.18
GSMUA_Achr2P16220_001	Banana	cytosol	57.34	29.5

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
EnsemblPlantsGene:GSMUA_Achr5G18890_001	EnsemblPlants:GSMUA_Achr5P18890_001	EnsemblPlants:GSMUA_Achr5T18890_001	InterPro:IPR002108	InterPro:IPR029006	UniProt:M0SZR8
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF16	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI00029536BE	:	:	:	:	:

Description

Actin-depolymerizing factor 5 [Source:GMGC_GENE;Acc:GSMUA_Achr5G18890_001]

Coordinates

chr5:+:20394900..20395849

Molecular Weight (calculated)

16505.0 Da

IEP (calculated)

9.107

GRAVY (calculated)

-0.383

Length

143 amino acids

Sequence
(BLAST)

001: MAMAFKMATE GMRVKQECLS SFMEMKWKKV SRYVVYKIDE KSREVMVDKV GRPGEGYEGL AASLPNDDCR YAVFDFDFLS VDNCQKSKIF FITWSPTASR
101: IRSKILYATS KQGLRRLLEG IHYEVQATDP TEMGFDVIKE RAK

Best Arabidopsis Sequence Match ( AT2G16700.1 )
(BLAST)

001: MAMAFKMATT GMRVTDECTS SFMDMKWKKV HRYIVFKIEE KSRKVTVDKV GGAGESYHDL EDSLPVDDCR YAVFDFDFVT VDNCRKSKIF FIAWSPEASK
101: IRAKILYATS KDGLRRVLEG IHYELQATDP TEMGFDIIQD RAK

Arabidopsis Description

ADF5ATADF5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.