Factsheet for GSMUA_Achr6P15330_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P29400_001	Banana	cytosol	53.33	48.98
GSMUA_Achr8P11370_001	Banana	cytosol	55.56	45.05
GSMUA_Achr6P15320_001	Banana	cytosol	65.56	44.7
GSMUA_Achr10P...	Banana	cytosol	61.11	41.67
GSMUA_Achr11P...	Banana	cytosol	57.78	39.39
GSMUA_AchrUn_...	Banana	extracellular	37.78	39.08
GSMUA_Achr11P...	Banana	cytosol	55.56	37.88
GSMUA_AchrUn_...	Banana	cytosol	53.33	36.36
GSMUA_Achr1P00290_001	Banana	cytosol	52.22	35.61
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	62.22	33.73
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	62.22	33.73
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	65.56	31.89
GSMUA_Achr7P00900_001	Banana	cytosol	46.67	31.82
GSMUA_Achr2P13120_001	Banana	cytosol	45.56	28.28
GSMUA_Achr2P17320_001	Banana	cytosol	44.44	27.59
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	43.33	27.27
GSMUA_Achr11P...	Banana	cytosol, plastid	43.33	27.27
GSMUA_Achr10P...	Banana	endoplasmic reticulum	64.44	26.73
GSMUA_Achr5P24750_001	Banana	cytosol	32.22	26.13
GSMUA_Achr5P12270_001	Banana	plastid, vacuole	53.33	23.88
GSMUA_Achr2P11510_001	Banana	cytosol	57.78	22.81
GSMUA_Achr11P...	Banana	cytosol	42.22	22.49
GSMUA_Achr1P09160_001	Banana	cytosol	47.78	22.05
GSMUA_Achr2P18590_001	Banana	cytosol	55.56	22.03
GSMUA_Achr2P16220_001	Banana	cytosol	65.56	21.22
GSMUA_Achr7P16650_001	Banana	cytosol	11.11	10.42

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
EnsemblPlantsGene:GSMUA_Achr6G15330_001	EnsemblPlants:GSMUA_Achr6P15330_001	EnsemblPlants:GSMUA_Achr6T15330_001	InterPro:IPR002108	InterPro:IPR029006	UniProt:M0T781
PFAM:PF00241	PRINTS:PR00006	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF30	SMART:SM00102
SUPFAM:SSF55753	UniParc:UPI0002953C2C	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G15330_001]

Coordinates

chr6:-:10219338..10220529

Molecular Weight (calculated)

10004.0 Da

IEP (calculated)

10.359

GRAVY (calculated)

-0.433

Length

90 amino acids

Sequence
(BLAST)

1: MSGDCMLFWN PRNLSPNHVG SSSGANAASR MAKSKIIFIV WSPDTSRVRS KMLYASSKDR FKRELDGIQV ELQATDPTEM GLDVIRGRAN

Best Arabidopsis Sequence Match ( AT1G01750.2 )
(BLAST)

001: MCLTVQANSA SGMHVSDECK LKFLELKAKR NYRFIVFKID EKAQQVMIDK LGNPEETYED FTRSIPEDEC RYAVYDYDFT TPENCQKSKI FFIAWSPDTS
101: RVRSKMLYAS SKDRFKRELD GIQVELQATD PSEMSLDIIK GRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.