Factsheet for GSMUA_Achr2P11510_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P11370_001	Banana	cytosol	44.74	91.89
GSMUA_Achr4P29400_001	Banana	cytosol	39.04	90.82
GSMUA_Achr11P...	Banana	cytosol	51.75	89.39
GSMUA_Achr1P00290_001	Banana	cytosol	50.44	87.12
EES05762	Sorghum	cytosol	52.19	85.61
TraesCS6D01G229200.1	Wheat	cytosol	52.19	85.61
VIT_16s0050g00220.t01	Wine grape	cytosol	49.56	85.61
EES12628	Sorghum	cytosol	51.75	84.89
TraesCS6A01G247000.1	Wheat	cytosol	51.75	84.89
GSMUA_Achr11P...	Banana	cytosol	49.12	84.85
GSMUA_AchrUn_...	Banana	cytosol	49.12	84.85
Zm00001d051388_P001	Maize	cytosol	50.88	83.45
Os04t0555700-01	Rice	plasma membrane	50.88	83.45
Zm00001d017516_P001	Maize	cytosol	50.44	82.73
TraesCS2B01G429500.1	Wheat	cytosol	50.44	82.73
TraesCS6B01G277600.1	Wheat	cytosol	50.88	80.0
GSMUA_Achr6P15320_001	Banana	cytosol	43.86	75.76
Solyc01g094400.2.1	Tomato	unclear	44.74	74.45
GSMUA_Achr10P...	Banana	cytosol	42.98	74.24
PGSC0003DMT400000464	Potato	cytosol	43.86	72.99
PGSC0003DMT400026582	Potato	mitochondrion	43.42	71.22
Solyc10g017550.2.1	Tomato	unclear	42.98	70.5
GSMUA_Achr5P12270_001	Banana	plastid, vacuole	58.33	66.17
GSMUA_Achr5P24750_001	Banana	cytosol	30.7	63.06
GSMUA_Achr7P00900_001	Banana	cytosol	36.4	62.88
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	44.74	61.45
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	44.74	61.45
GSMUA_Achr2P13120_001	Banana	cytosol	38.6	60.69
GSMUA_Achr2P17320_001	Banana	cytosol	37.72	59.31
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	47.37	58.38
GSMUA_Achr6P15330_001	Banana	cytosol, plastid	22.81	57.78
GSMUA_Achr7P16650_001	Banana	cytosol	24.12	57.29
GSMUA_Achr2P18590_001	Banana	cytosol	55.7	55.95
GSMUA_Achr11P...	Banana	cytosol, plastid	35.09	55.94
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	35.09	55.94
VIT_15s0046g03040.t01	Wine grape	cytosol	57.46	51.17
GSMUA_Achr10P...	Banana	endoplasmic reticulum	48.25	50.69
GSMUA_Achr11P...	Banana	cytosol	35.09	47.34
GSMUA_Achr1P09160_001	Banana	cytosol	37.28	43.59
GSMUA_Achr2P16220_001	Banana	cytosol	51.32	42.09
GSMUA_AchrUn_...	Banana	extracellular	15.79	41.38

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:GSMUA_Achr2G11510_001	EnsemblPlants:GSMUA_Achr2P11510_001	EnsemblPlants:GSMUA_Achr2T11510_001	InterPro:IPR002108
InterPro:IPR029006	UniProt:M0S742	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF31
SMART:SM00102	SUPFAM:SSF55753	TMHMM:TMhelix	UniParc:UPI0002963772	SEG:seg	:

Description

Actin-depolymerizing factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G11510_001]

Coordinates

chr2:-:14338126..14339425

Molecular Weight (calculated)

26097.4 Da

IEP (calculated)

7.303

GRAVY (calculated)

-0.091

Length

228 amino acids

Sequence
(BLAST)

001: MYSVCERFGQ RANYSSATAV DVAACKCFAD GLRTLSSPTF PSSLHSHLFL LIPRIIYSSL SLFLLYSLLF SFLFLTIPWG WLIPHRQDTM ANSASGMAVS
101: DECKLKFLEL KAKRNFRFIV FKIEEKIQQV KVERLGQPGE SYDDLTASLP DDDCRYAVFD FDFITDENCQ KSKIFFISWS PDTSRVRNKM LYASSKDRFK
201: RELDGIQVEL QATDPSEMSI DIIKGRAL

Best Arabidopsis Sequence Match ( AT4G00680.1 )
(BLAST)

001: MANSASGMHV NDECKIKFLE LKAKRTYRFI VFKIDEKAQQ VQIEKLGNPE ETYDDFTSSI PDDECRYAVY DFDFTTEDNC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL

Arabidopsis Description

ADF8actin depolymerizing factor 8 [Source:TAIR;Acc:AT4G00680]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.