Factsheet for GSMUA_Achr5P12270_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole

Predictor Summary:

plastid 5
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P11370_001	Banana	cytosol	50.25	90.99
GSMUA_Achr1P00290_001	Banana	cytosol	59.2	90.15
GSMUA_AchrUn_...	Banana	cytosol	57.71	87.88
GSMUA_Achr11P...	Banana	cytosol	56.72	86.36
GSMUA_Achr4P29400_001	Banana	cytosol	41.29	84.69
VIT_16s0050g00220.t01	Wine grape	cytosol	55.22	84.09
GSMUA_Achr11P...	Banana	cytosol	54.73	83.33
GSMUA_Achr6P15320_001	Banana	cytosol	51.74	78.79
GSMUA_Achr10P...	Banana	cytosol	50.25	76.52
Solyc01g094400.2.1	Tomato	unclear	51.24	75.18
PGSC0003DMT400000464	Potato	cytosol	50.25	73.72
PGSC0003DMT400026582	Potato	mitochondrion	49.75	71.94
Solyc10g017550.2.1	Tomato	unclear	49.25	71.22
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	55.72	67.47
GSMUA_Achr5P24750_001	Banana	cytosol	36.32	65.77
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	54.23	65.66
GSMUA_Achr10P...	Banana	endoplasmic reticulum, vacuole	60.2	65.41
GSMUA_Achr7P00900_001	Banana	cytosol	42.29	64.39
GSMUA_Achr2P13120_001	Banana	cytosol	44.28	61.38
GSMUA_Achr2P17320_001	Banana	cytosol	43.78	60.69
GSMUA_Achr7P16650_001	Banana	cytosol	28.36	59.38
GSMUA_Achr2P18590_001	Banana	cytosol	66.17	58.59
GSMUA_Achr2P11510_001	Banana	cytosol	66.17	58.33
GSMUA_Achr11P...	Banana	cytosol, plastid	39.8	55.94
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	39.3	55.24
GSMUA_Achr6P15330_001	Banana	cytosol, plastid	23.88	53.33
GSMUA_Achr10P...	Banana	endoplasmic reticulum	56.72	52.53
VIT_15s0046g03040.t01	Wine grape	cytosol	62.19	48.83
GSMUA_Achr11P...	Banana	cytosol	40.3	47.93
GSMUA_Achr1P09160_001	Banana	cytosol	43.28	44.62
GSMUA_Achr2P16220_001	Banana	cytosol	60.2	43.53
GSMUA_AchrUn_...	Banana	extracellular	16.92	39.08

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
EnsemblPlantsGene:GSMUA_Achr5G12270_001	EnsemblPlants:GSMUA_Achr5P12270_001	EnsemblPlants:GSMUA_Achr5T12270_001	InterPro:IPR002108	InterPro:IPR029006	UniProt:M0SXV6
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF30	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI0002964400	SEG:seg	:	:	:	:

Description

Actin-depolymerizing factor [Source:GMGC_GENE;Acc:GSMUA_Achr5G12270_001]

Coordinates

chr5:-:8827840..8829107

Molecular Weight (calculated)

22828.6 Da

IEP (calculated)

7.911

GRAVY (calculated)

-0.109

Length

201 amino acids

Sequence
(BLAST)

001: MISNLNVIII LNDIFLCSLQ NNPTSFKSSP ASSLPLSPFF LLPFPLQSPF SLGLLIPHRK YIMANSASGM AVNDECKLKF LELKAKRNFR FIVFKIDEKL
101: QQVTVEKLGQ PEQSYDDLAA SLPPNECRYA VYDFDFVTDE NCQRSKIFFI AWSPDASRVR SKMLYASSKD RFKRELDGIQ VEVQATDPSE MSIDIVKGRA
201: I

Best Arabidopsis Sequence Match ( AT4G00680.1 )
(BLAST)

001: MANSASGMHV NDECKIKFLE LKAKRTYRFI VFKIDEKAQQ VQIEKLGNPE ETYDDFTSSI PDDECRYAVY DFDFTTEDNC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KREMEGIQVE LQATDPSEMS LDIIKGRLNL

Arabidopsis Description

ADF8actin depolymerizing factor 8 [Source:TAIR;Acc:AT4G00680]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.