Factsheet for HORVU4Hr1G063830.6

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G228100.1	Wheat	cytosol	97.2	97.2
TraesCS4B01G227300.1	Wheat	cytosol	96.5	96.5
TraesCS4A01G071400.1	Wheat	cytosol	96.5	96.5
Zm00001d028392_P001	Maize	cytosol	94.41	94.41
Os03t0243100-01	Rice	cytosol	93.71	93.71
GSMUA_Achr5P18890_001	Banana	cytosol, plastid	79.72	79.72
GSMUA_Achr11P...	Banana	cytosol, plastid	79.02	79.02
Zm00001d047942_P001	Maize	mitochondrion	93.01	77.33
KRH24296	Soybean	cytosol, plastid	76.22	76.22
KRH29274	Soybean	cytosol	69.93	75.76
VIT_03s0038g02220.t01	Wine grape	cytosol	69.93	75.76
Solyc01g111380.2.1	Tomato	cytosol, plastid	75.52	75.52
PGSC0003DMT400015865	Potato	cytosol	75.52	75.52
CDY02247	Canola	cytosol	74.83	74.83
KRH51402	Soybean	cytosol	74.83	74.83
CDX89737	Canola	cytosol	74.83	74.83
Bra013058.1-P	Field mustard	cytosol	74.83	74.83
AT2G16700.1	Thale cress	cytosol	72.03	72.03
AT4G34970.1	Thale cress	cytosol	69.23	70.21
CDX75477	Canola	cytosol	58.04	68.59
Bra017683.1-P	Field mustard	cytosol	63.64	67.41
Bra011575.1-P	Field mustard	cytosol	66.43	66.9
CDX69101	Canola	cytosol	66.43	66.9
CDY40654	Canola	cytosol	57.34	66.67
CDX72508	Canola	cytosol	63.64	66.42
OQU92928	Sorghum	cytosol, plastid	93.01	65.2
GSMUA_Achr11P...	Banana	cytosol	76.92	65.09
HORVU0Hr1G000200.1	Barley	cytosol	54.55	56.12
HORVU2Hr1G053570.1	Barley	cytosol	48.25	49.64
HORVU1Hr1G048450.4	Barley	cytosol	53.15	48.1
HORVU2Hr1G053580.1	Barley	mitochondrion	47.55	44.44
HORVU5Hr1G113020.2	Barley	cytosol	27.97	38.46
HORVU5Hr1G045750.1	Barley	cytosol	47.55	38.2
HORVU5Hr1G045770.1	Barley	plastid	48.25	38.12
HORVU5Hr1G100770.1	Barley	cytosol, plastid	50.35	36.0
HORVU5Hr1G113010.1	Barley	cytosol, plastid	35.66	34.69
HORVU5Hr1G113060.1	Barley	mitochondrion	48.25	30.8
HORVU2Hr1G097130.3	Barley	cytosol	39.16	29.63

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	EMBL:AK359914
UniProt:F2D7Q2	GO:GO:0003674	GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629
GO:GO:0016043	GO:GO:0030042	EnsemblPlantsGene:HORVU4Hr1G063830	EnsemblPlants:HORVU4Hr1G063830.6	InterPro:IPR002108	InterPro:IPR029006
PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF16	SMART:SM00102	SUPFAM:SSF55753
UniParc:UPI00020058FE	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D7Q2]

Coordinates

chrchr4H:-:534877494..534880480

Molecular Weight (calculated)

16500.9 Da

IEP (calculated)

8.453

GRAVY (calculated)

-0.327

Length

143 amino acids

Sequence
(BLAST)

001: MAMAYKMATE GMNIKEECKR WFTEMKWKKV HRFVVYKIDE RTRAVLVDKV GGPGEGYEEL VAALPTDDCR YAVFDFDFVS VDNCQKSKIF FIAWSPAASR
101: IRAKILYATS KQGLRRVLDG VHYEVQATDP SEMGFDVIRE RAQ

Best Arabidopsis Sequence Match ( AT2G16700.1 )
(BLAST)

001: MAMAFKMATT GMRVTDECTS SFMDMKWKKV HRYIVFKIEE KSRKVTVDKV GGAGESYHDL EDSLPVDDCR YAVFDFDFVT VDNCRKSKIF FIAWSPEASK
101: IRAKILYATS KDGLRRVLEG IHYELQATDP TEMGFDIIQD RAK

Arabidopsis Description

ADF5ATADF5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPY9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.