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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 3
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G492400.1 Wheat cytosol 80.27 85.51
TraesCS5A01G478900.1 Wheat golgi, nucleus, plastid, unclear 80.27 85.51
Os03t0820600-01 Rice cytosol, extracellular, plastid 57.14 60.43
KXG37255 Sorghum cytosol 53.74 56.83
Zm00001d034644_P001 Maize plastid 52.38 55.4
Zm00001d012966_P001 Maize plastid 52.38 55.4
HORVU0Hr1G000200.1 Barley cytosol 47.62 50.36
HORVU2Hr1G053570.1 Barley cytosol 44.22 46.76
HORVU2Hr1G053580.1 Barley mitochondrion 43.54 41.83
HORVU4Hr1G063830.6 Barley cytosol 34.69 35.66
HORVU5Hr1G045750.1 Barley cytosol 40.14 33.15
HORVU5Hr1G045770.1 Barley plastid 36.73 29.83
HORVU5Hr1G113020.2 Barley cytosol 20.41 28.85
HORVU1Hr1G048450.4 Barley cytosol 30.61 28.48
HORVU5Hr1G100770.1 Barley cytosol, plastid 38.1 28.0
HORVU5Hr1G113060.1 Barley mitochondrion 37.41 24.55
HORVU2Hr1G097130.3 Barley cytosol 29.93 23.28
Protein Annotations
MapMan:20.2.2.8Gene3D:3.40.20.10UniProt:A0A287SS24InterPro:ADF-HInterPro:ADF-H/Gelsolin-like_dom_sfInterPro:ADF/Cofilin
GO:GO:0003674GO:GO:0003779GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005856GO:GO:0008150GO:GO:0009987GO:GO:0015629GO:GO:0016043
GO:GO:0030042EnsemblPlantsGene:HORVU5Hr1G113010EnsemblPlants:HORVU5Hr1G113010.1InterPro:IPR002108InterPro:IPR029006PFAM:PF00241
PRINTS:PR00006PFscan:PS51263PANTHER:PTHR11913PANTHER:PTHR11913:SF50SMART:SM00102SUPFAM:SSF55753
UniParc:UPI000B46B1DASEG:seg::::
Description
No Description!
Coordinates
chrchr5H:-:640716835..640718661
Molecular Weight (calculated)
16632.5 Da
IEP (calculated)
7.604
GRAVY (calculated)
-0.744
Length
147 amino acids
Sequence
(BLAST)
001: SNPSTPSPFP SPSPPDSSFP SRLPSSAMAN ASSGAGIHDD CKLRFVELKS KRMHRFITYR LENQKEVIVD QTGQRDATYE DFTTPEDVPK SRIFYIFWSP
101: DTAKVRSKMT YASTNEKFKR TLDGIQIEMQ ATDPSEISLD VIKERAH
Best Arabidopsis Sequence Match ( AT3G46010.1 )
(BLAST)
001: MANAASGMAV HDDCKLRFLE LKAKRTHRFI VYKIEEKQKQ VVVEKVGQPI QTYEEFAACL PADECRYAIY DFDFVTAENC QKSKIFFIAW CPDIAKVRSK
101: MIYASSKDRF KRELDGIQVE LQATDPTEMD LDVFRSRAN
Arabidopsis Description
ADF1Actin depolymerizing factor 1 [Source:UniProtKB/TrEMBL;Acc:A8MR09]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.