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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G491500.1 Wheat cytosol 72.93 92.96
HORVU5Hr1G113060.1 Barley mitochondrion 100.0 80.8
TraesCS5A01G478500.1 Wheat mitochondrion 83.43 75.5
Os03t0820500-01 Rice plastid 55.8 67.33
HORVU5Hr1G045750.1 Barley cytosol 61.88 62.92
Zm00001d034643_P001 Maize cytosol 50.83 61.74
TraesCS5D01G491900.1 Wheat plastid 79.56 61.28
HORVU0Hr1G000200.1 Barley cytosol 38.67 50.36
HORVU5Hr1G113020.2 Barley cytosol 28.73 50.0
HORVU4Hr1G063830.6 Barley cytosol 38.12 48.25
KXG37257 Sorghum cytosol, plastid 55.8 47.87
HORVU2Hr1G053570.1 Barley cytosol 35.36 46.04
HORVU2Hr1G053580.1 Barley mitochondrion 34.81 41.18
HORVU1Hr1G048450.4 Barley cytosol 35.36 40.51
HORVU5Hr1G113010.1 Barley cytosol, plastid 29.83 36.73
HORVU5Hr1G100770.1 Barley cytosol, plastid 34.25 31.0
HORVU2Hr1G097130.3 Barley cytosol 29.83 28.57
Protein Annotations
MapMan:20.2.2.8Gene3D:3.40.20.10UniProt:A0A287R1C6InterPro:ADF-HInterPro:ADF-H/Gelsolin-like_dom_sfInterPro:ADF/Cofilin
GO:GO:0003674GO:GO:0003779GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005856GO:GO:0008150GO:GO:0009987GO:GO:0015629GO:GO:0016043
GO:GO:0030042EnsemblPlantsGene:HORVU5Hr1G045770EnsemblPlants:HORVU5Hr1G045770.1InterPro:IPR002108InterPro:IPR029006PFAM:PF00241
PFscan:PS51263PANTHER:PTHR11913PANTHER:PTHR11913:SF51SMART:SM00102SUPFAM:SSF55753UniParc:UPI000B46549B
SEG:seg:::::
Description
No Description!
Coordinates
chrchr5H:+:354890137..354890937
Molecular Weight (calculated)
20105.2 Da
IEP (calculated)
4.370
GRAVY (calculated)
-0.432
Length
181 amino acids
Sequence
(BLAST)
001: QHIITANHQL SSYEQLLSQH QHTQIFPRSS QPPDPSTMAN SVSGVAVSEE CVKVFQELRA ERKHRFVVYK MDDDADAQQV VVDKVGGLEA SFDDLAAAMP
101: ADDCRYAVYD LDFVSEDSAG DTPRSKIFFI HWSPEAADSR SKMVYASSTE GLKKELDGVQ IDVQATDASE LTLDILKDYT T
Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)
001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL
Arabidopsis Description
ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.