Factsheet for TraesCS5D01G491900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G491500.1	Wheat	cytosol	60.0	99.3
TraesCS5A01G478500.1	Wheat	mitochondrion	78.72	92.5
HORVU5Hr1G045770.1	Barley	plastid	61.28	79.56
HORVU5Hr1G113060.1	Barley	mitochondrion	71.91	75.45
TraesCS5D01G492300.1	Wheat	cytosol	45.53	72.79
Os03t0820500-01	Rice	plastid	42.13	66.0
Zm00001d034643_P001	Maize	cytosol	37.45	59.06
TraesCS6D01G229200.1	Wheat	cytosol	31.06	52.52
TraesCS2D01G235200.1	Wheat	cytosol	27.66	46.76
KXG37257	Sorghum	cytosol, plastid	41.7	46.45
TraesCS4D01G228100.1	Wheat	cytosol	28.09	46.15
TraesCS5D01G492400.1	Wheat	cytosol	25.96	44.2
TraesCS1D01G186600.1	Wheat	cytosol	27.23	42.38
TraesCS5D01G423800.1	Wheat	golgi	25.96	42.07

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF51
SMART:SM00102	SUPFAM:SSF55753	EnsemblPlantsGene:TraesCS5D01G491900	EnsemblPlants:TraesCS5D01G491900.1	TIGR:cd11286	SEG:seg

Description

No Description!

Coordinates

chr5D:+:525471516..525472344

Molecular Weight (calculated)

25908.2 Da

IEP (calculated)

5.545

GRAVY (calculated)

-0.498

Length

235 amino acids

Sequence
(BLAST)

001: MIPLPPAPSS TRPEQSAPSM STATSQRLHV RVHPRTPLTL SRRHGHGPPI KSPHPTLLNQ QHSSPPTISF QSSYQFQFST QIFSSGQPPD PSTMANSVSG
101: VAVNEECVKA FQELRADRKH RFVVYKMDDD AQQVVVDKVG ALDATFDDLA AAMPADDCRY AVYDLDFVSE DSAGETPRSK IFFIHWSPES ADARNKMLYA
201: SSTEGLKKEL DGVQIDVQAT DASELTLDIL KDYTT

Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)

001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.