Factsheet for TraesCS1D01G186600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G197600.1	Wheat	cytosol	98.68	99.33
HORVU1Hr1G048450.4	Barley	cytosol	98.01	93.67
Os10t0521100-01	Rice	cytosol	90.73	90.73
TraesCS1A01G183100.2	Wheat	cytosol	92.72	90.32
KXG39048	Sorghum	plastid	92.72	74.07
KRH51874	Soybean	cytosol	54.97	70.94
VIT_07s0005g03310.t01	Wine grape	cytosol	62.25	65.73
VIT_05s0049g00980.t01	Wine grape	cytosol	61.59	65.03
Zm00001d029656_P003	Maize	cytosol	88.74	63.81
KRH67374	Soybean	cytosol	61.59	63.7
KRH34385	Soybean	cytosol	62.25	63.51
KRG92420	Soybean	cytosol	61.59	62.84
Solyc09g072590.2.1	Tomato	cytosol	60.26	62.76
KRG95660	Soybean	cytosol	60.26	62.33
PGSC0003DMT400044218	Potato	cytosol	58.94	61.38
Solyc09g090110.2.1	Tomato	cytosol	58.94	61.38
Bra018268.1-P	Field mustard	mitochondrion	57.62	59.59
CDY10786	Canola	cytosol	57.62	59.59
AT2G31200.1	Thale cress	cytosol	57.62	59.59
CDY24750	Canola	cytosol	56.95	58.9
TraesCS5D01G423800.1	Wheat	golgi	52.32	54.48
Solyc09g072600.1.1	Tomato	cytosol	17.22	53.06
TraesCS6D01G229200.1	Wheat	cytosol	47.02	51.08
TraesCS4D01G228100.1	Wheat	cytosol	48.34	51.05
PGSC0003DMT400026656	Potato	mitochondrion	60.93	50.83
TraesCS2D01G235200.1	Wheat	cytosol	46.36	50.36
TraesCS5D01G492300.1	Wheat	cytosol	41.72	42.86
TraesCS5D01G492400.1	Wheat	cytosol	35.76	39.13
Os07t0297500-00	Rice	cytosol	56.95	37.07
TraesCS5D01G491900.1	Wheat	plastid	42.38	27.23

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin	GO:GO:0003674
GO:GO:0003779	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042
InterPro:IPR002108	InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF25
SMART:SM00102	SUPFAM:SSF55753	EnsemblPlantsGene:TraesCS1D01G186600	EnsemblPlants:TraesCS1D01G186600.1	TIGR:cd11286	:

Description

No Description!

Coordinates

chr1D:-:257474295..257475731

Molecular Weight (calculated)

17494.6 Da

IEP (calculated)

4.759

GRAVY (calculated)

-0.436

Length

151 amino acids

Sequence
(BLAST)

001: MEFLGFTLMV GGNSPAWIDV PERSKSAFME LKRRKVHRYV IFKIDDITEE VVVEKTGAPG ESYDDFTASL PVDDCRYAVY DLDFVSDDNC RKSKIFFISW
101: SPDDSRIRAK TIYAVSRNQF RHELDGVHFE IQATDPDDMD LEVLRVRANR T

Best Arabidopsis Sequence Match ( AT1G01750.2 )
(BLAST)

001: MCLTVQANSA SGMHVSDECK LKFLELKAKR NYRFIVFKID EKAQQVMIDK LGNPEETYED FTRSIPEDEC RYAVYDYDFT TPENCQKSKI FFIAWSPDTS
101: RVRSKMLYAS SKDRFKRELD GIQVELQATD PSEMSLDIIK GRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.