Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G59880.1 | CDX73342 | AT1G35670.1 | 19130088 |
| AT5G59880.1 | CDY37101 | AT1G35670.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002522.1-P | Field mustard | cytosol | 99.24 | 94.24 |
| CDX71067 | Canola | cytosol | 86.36 | 86.36 |
| KRH19714 | Soybean | nucleus | 87.88 | 83.45 |
| CDX88730 | Canola | cytosol | 96.21 | 82.47 |
| AT5G59880.1 | Thale cress | cytosol | 86.36 | 82.01 |
| GSMUA_Achr10P... | Banana | cytosol | 81.82 | 81.82 |
| KRH11708 | Soybean | mitochondrion | 83.33 | 79.14 |
| KRH36708 | Soybean | mitochondrion | 82.58 | 78.42 |
| GSMUA_Achr6P15320_001 | Banana | cytosol | 78.03 | 78.03 |
| Os05t0113400-01 | Rice | cytosol, extracellular, plastid | 81.06 | 77.54 |
| CDY52365 | Canola | cytosol | 75.76 | 77.52 |
| CDX89411 | Canola | cytosol | 75.76 | 77.52 |
| CDX94438 | Canola | cytosol | 75.76 | 77.52 |
| CDX71068 | Canola | cytosol | 96.21 | 77.44 |
| PGSC0003DMT400008913 | Potato | cytosol | 80.3 | 77.37 |
| Solyc06g005360.2.1 | Tomato | cytosol, extracellular, nucleus | 80.3 | 77.37 |
| KRH32309 | Soybean | cytosol, nucleus | 84.09 | 77.08 |
| EER95084 | Sorghum | cytosol | 80.3 | 76.26 |
| HORVU0Hr1G000200.1 | Barley | cytosol | 78.79 | 74.82 |
| CDY31909 | Canola | cytosol | 73.48 | 74.62 |
| CDY09242 | Canola | cytosol | 86.36 | 74.51 |
| EES17589 | Sorghum | cytosol | 78.03 | 74.1 |
| CDY32581 | Canola | cytosol | 29.55 | 72.22 |
| Zm00001d035629_P001 | Maize | cytosol | 75.0 | 71.22 |
| CDX90057 | Canola | cytosol | 70.45 | 69.92 |
| Zm00001d035625_P001 | Maize | cytosol | 68.94 | 69.47 |
| CDX99133 | Canola | cytosol, plastid | 86.36 | 68.26 |
| CDX86048 | Canola | cytosol, plastid | 85.61 | 67.66 |
| CDY54088 | Canola | cytosol | 49.24 | 67.01 |
| GSMUA_Achr9P04050_001 | Banana | endoplasmic reticulum, extracellular | 81.82 | 65.06 |
| GSMUA_Achr6P33310_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 81.06 | 64.46 |
| CDY15154 | Canola | cytosol | 70.45 | 62.0 |
| CDY72027 | Canola | cytosol | 48.48 | 59.81 |
| CDY24750 | Canola | cytosol | 65.91 | 59.59 |
| VIT_10s0092g00330.t01 | Wine grape | cytosol | 40.91 | 59.34 |
| VIT_08s0040g03360.t01 | Wine grape | plastid | 84.85 | 59.26 |
| CDY10786 | Canola | cytosol | 65.15 | 58.9 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, vacuole | 81.06 | 57.84 |
| CDX88731 | Canola | cytosol, plastid | 86.36 | 57.29 |
| VIT_11s0103g00260.t01 | Wine grape | cytosol | 50.0 | 55.93 |
| CDX75477 | Canola | cytosol | 50.0 | 54.55 |
| CDX92721 | Canola | mitochondrion | 73.48 | 54.19 |
| CDY40654 | Canola | cytosol | 50.0 | 53.66 |
| CDY38025 | Canola | cytosol | 71.21 | 53.41 |
| CDX80216 | Canola | cytosol | 100.0 | 52.38 |
| CDX69101 | Canola | cytosol | 53.79 | 50.0 |
| CDX89737 | Canola | cytosol | 53.79 | 49.65 |
| CDY02247 | Canola | cytosol | 53.79 | 49.65 |
| CDX72508 | Canola | cytosol | 51.52 | 49.63 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 81.06 | 49.31 |
| CDY02249 | Canola | cytosol | 22.73 | 46.15 |
| CDY50194 | Canola | cytosol | 73.48 | 45.54 |
| GSMUA_Achr2P16220_001 | Banana | cytosol | 82.58 | 39.21 |
| CDY07204 | Canola | cytosol | 68.18 | 33.21 |
| CDY51146 | Canola | cytosol, mitochondrion | 67.42 | 25.28 |
Protein Annotations
| MapMan:20.2.2.8 | Gene3D:3.40.20.10 | GO:A0A078H1E0 | UniProt:A0A078H1E0 | InterPro:ADF-H | InterPro:ADF-H/Gelsolin-like_dom_sf |
| InterPro:ADF/Cofilin | EnsemblPlants:CDY31586 | ProteinID:CDY31586 | ProteinID:CDY31586.1 | GO:GO:0003674 | GO:GO:0003779 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015629 | GO:GO:0016043 | GO:GO:0030042 | EnsemblPlantsGene:GSBRNA2T00047913001 |
| InterPro:IPR002108 | InterPro:IPR029006 | PFAM:PF00241 | PFscan:PS51263 | PANTHER:PTHR11913 | PANTHER:PTHR11913:SF27 |
| SMART:SM00102 | SUPFAM:SSF55753 | UniParc:UPI0000E647DB | : | : | : |
Description
BnaA10g12850DBnaA10g12850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1E0]
Coordinates
chrLK032274:-:447920..449126
Molecular Weight (calculated)
15268.1 Da
IEP (calculated)
5.816
GRAVY (calculated)
-0.455
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVHDDCKLK FLELKAKRTF RFIVYKIEEQ QKQVVVEKLG EPGQSHDDFA ASLPADECRY AVFDFDFVTA ESCQKSKIFF VAWSPDTARV RSKMIYASSK
101: DRFKRELDGI QVELQATDPT EMDLDVFKSR AN
101: DRFKRELDGI QVELQATDPT EMDLDVFKSR AN
001: MANAASGMAV HDDCKLRFLE LKAKRTHRFI VYKIEEKQKQ VVVEKVGQPI QTYEEFAACL PADECRYAIY DFDFVTAENC QKSKIFFIAW CPDIAKVRSK
101: MIYASSKDRF KRELDGIQVE LQATDPTEMD LDVFRSRAN
101: MIYASSKDRF KRELDGIQVE LQATDPTEMD LDVFRSRAN
Arabidopsis Description
ADF1Actin depolymerizing factor 1 [Source:UniProtKB/TrEMBL;Acc:A8MR09]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.