CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES09373
EES16732

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G59880.1	EES09373	AT1G35670.1	19130088
AT5G59880.1	EES16732	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	80.58	84.85
KRH19714	Soybean	nucleus	84.17	84.17
VIT_13s0019g00550.t01	Wine grape	cytosol	82.01	82.01
Solyc10g084660.1.1	Tomato	cytosol, extracellular	81.3	81.3
AT5G59890.1	Thale cress	cytosol	80.58	80.58
Bra002522.1-P	Field mustard	cytosol	80.58	80.58
PGSC0003DMT400023061	Potato	cytosol	80.58	80.58
Solyc09g010440.2.1	Tomato	plastid	80.58	80.58
PGSC0003DMT400071339	Potato	cytosol	82.73	80.42
CDY31586	Canola	cytosol	76.26	80.3
EES17589	Sorghum	cytosol	79.86	79.86
PGSC0003DMT400028567	Potato	cytosol	79.86	79.86
Solyc04g011370.2.1	Tomato	extracellular	82.01	79.72
CDX71067	Canola	cytosol	74.82	78.79
Bra006686.1-P	Field mustard	cytosol	74.82	78.79
PGSC0003DMT400087280	Potato	cytosol	76.98	78.68
KRH32309	Soybean	cytosol, nucleus	79.86	77.08
KRH11708	Soybean	mitochondrion	76.98	76.98
KRH36708	Soybean	mitochondrion	76.26	76.26
PGSC0003DMT400008913	Potato	cytosol	74.82	75.91
Solyc06g005360.2.1	Tomato	cytosol, extracellular, nucleus	74.82	75.91
Bra020277.1-P	Field mustard	cytosol	80.58	75.17
AT3G46010.2	Thale cress	cytosol	79.86	74.0
EES05762	Sorghum	cytosol	73.38	73.38
AT5G59880.1	Thale cress	cytosol	73.38	73.38
Bra006687.1-P	Field mustard	cytosol	80.58	73.2
CDX88730	Canola	cytosol	80.58	72.73
Bra020276.1-P	Field mustard	cytosol	79.14	71.9
CDY09242	Canola	cytosol	78.42	71.24
GSMUA_Achr9P04050_001	Banana	endoplasmic reticulum, extracellular	84.17	70.48
AT3G46000.2	Thale cress	cytosol	78.42	69.87
EES12628	Sorghum	cytosol	69.78	69.78
VIT_06s0004g04280.t01	Wine grape	cytosol	83.45	69.05
GSMUA_Achr6P33310_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	82.01	68.67
CDX71068	Canola	cytosol	80.58	68.29
EER97221	Sorghum	cytosol	66.91	66.91
CDX99133	Canola	cytosol, plastid	78.42	65.27
Bra038266.1-P	Field mustard	cytosol	78.42	65.27
CDX86048	Canola	cytosol, plastid	77.7	64.67
VIT_11s0103g00260.t01	Wine grape	cytosol	51.8	61.02
VIT_08s0040g03360.t01	Wine grape	plastid	82.73	60.85
EER90794	Sorghum	cytosol	61.15	58.62
KXG37255	Sorghum	cytosol	57.55	57.55
VIT_10s0092g00330.t01	Wine grape	cytosol	37.41	57.14
AT3G45990.1	Thale cress	cytosol	54.68	57.14
CDX88731	Canola	cytosol, plastid	79.86	55.78
CDX80216	Canola	cytosol	81.3	44.84
OQU92928	Sorghum	cytosol, plastid	58.99	40.2
KXG39048	Sorghum	plastid	49.64	36.51
KXG37257	Sorghum	cytosol, plastid	53.96	35.55

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	EntrezGene:8081480	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
UniProt:C5WPD3	EnsemblPlants:EER95084	ProteinID:EER95084	ProteinID:EER95084.1	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108
InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF50	SMART:SM00102
EnsemblPlantsGene:SORBI_3001G417600	SUPFAM:SSF55753	unigene:Sbi.11969	UniParc:UPI0001A830CB	RefSeq:XP_002468086.1	:

Description

hypothetical protein

Coordinates

chr1:-:69861575..69869863

Molecular Weight (calculated)

15956.1 Da

IEP (calculated)

5.370

GRAVY (calculated)

-0.453

Length

139 amino acids

Sequence
(BLAST)

001: MANAASGMAV DDDCKRKFLE LKAKRTYRFV VFKIEEKQKQ VVVDKLGEPN LTYDDFAATL PADECRYCVY DFDFVTEEGC QKSKIFFIAW SPDTAKIRSK
101: MLYASSKERF KRELDGIQVE LQATDPTEMG IDVIRGRAN

Best Arabidopsis Sequence Match ( AT5G59890.1 )
(BLAST)

001: MANAASGMAV HDDCKLRFLE LKAKRTHRFI VYKIEEKQKQ VIVEKVGEPI LTYEDFAASL PADECRYAIY DFDFVTAENC QKSKIFFIAW CPDVAKVRSK
101: MIYASSKDRF KRELDGIQVE LQATDPTEMD LDVLKSRVN

Arabidopsis Description

ADF4Actin-depolymerizing factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSK3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.