CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0484200-01	Rice	plasma membrane	84.17	84.17
TraesCS2A01G227300.1	Wheat	cytosol	83.45	83.45
TraesCS2B01G255200.1	Wheat	cytosol	83.45	83.45
TraesCS2D01G235200.1	Wheat	cytosol	82.73	82.73
HORVU2Hr1G053570.1	Barley	cytosol	82.01	82.01
HORVU2Hr1G053580.1	Barley	mitochondrion	81.3	73.86
EES05762	Sorghum	cytosol	72.66	72.66
EES12628	Sorghum	cytosol	70.5	70.5
EER95084	Sorghum	cytosol	66.91	66.91
EES17589	Sorghum	cytosol	64.03	64.03
KXG37255	Sorghum	cytosol	56.12	56.12
EER90794	Sorghum	cytosol	46.76	44.83
KXG39048	Sorghum	plastid	51.8	38.1
KXG37257	Sorghum	cytosol, plastid	53.24	35.07
OQU92928	Sorghum	cytosol, plastid	50.36	34.31
Zm00001d002714_P003	Maize	cytosol	33.09	26.74

Protein Annotations

MapMan:20.2.2.8	Gene3D:3.40.20.10	EntrezGene:8080684	InterPro:ADF-H	InterPro:ADF-H/Gelsolin-like_dom_sf	InterPro:ADF/Cofilin
UniProt:C5X8K9	EnsemblPlants:EER97221	ProteinID:EER97221	ProteinID:EER97221.1	GO:GO:0003674	GO:GO:0003779
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0008150	GO:GO:0009987	GO:GO:0015629	GO:GO:0016043	GO:GO:0030042	InterPro:IPR002108
InterPro:IPR029006	PFAM:PF00241	PFscan:PS51263	PANTHER:PTHR11913	PANTHER:PTHR11913:SF23	SMART:SM00102
EnsemblPlantsGene:SORBI_3002G303500	SUPFAM:SSF55753	UniParc:UPI0001A83B3F	RefSeq:XP_002460700.1	:	:

Description

hypothetical protein

Coordinates

chr2:+:67939196..67940508

Molecular Weight (calculated)

16137.0 Da

IEP (calculated)

5.353

GRAVY (calculated)

-0.647

Length

139 amino acids

Sequence
(BLAST)

001: MANSASGLAV NDECKVKFRE LKARRSFRFI VFRIDDKDME IKVDRLGEPN QGYGDFTDSL PADECRYAIY DLDFTTVENC QKSKIFFFSW SPDTARTRSK
101: MLYASSKDRF RRELDGIQCE IQATDPSEMS LDIVRSRTN

Best Arabidopsis Sequence Match ( AT1G01750.1 )
(BLAST)

001: MANSASGMHV SDECKLKFLE LKAKRNYRFI VFKIDEKAQQ VMIDKLGNPE ETYEDFTRSI PEDECRYAVY DYDFTTPENC QKSKIFFIAW SPDTSRVRSK
101: MLYASSKDRF KRELDGIQVE LQATDPSEMS LDIIKGRVNL

Arabidopsis Description

ADF11actin depolymerizing factor 11 [Source:TAIR;Acc:AT1G01750]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.