Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 3
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
27664331
|
msms PMID:
27664331
doi
Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH53856 | Soybean | endoplasmic reticulum, mitochondrion | 71.52 | 99.1 |
KRH64098 | Soybean | cytosol | 81.09 | 98.94 |
AT5G09810.1 | Thale cress | cytosol | 80.87 | 98.67 |
CDX69885 | Canola | cytosol | 80.87 | 98.67 |
CDY21607 | Canola | cytosol | 80.87 | 98.67 |
KRH43389 | Soybean | cytosol | 80.87 | 98.67 |
KRH59535 | Soybean | cytosol | 80.87 | 98.67 |
PGSC0003DMT400047481 | Potato | cytosol | 80.87 | 98.67 |
Solyc03g078400.2.1 | Tomato | nucleus, plastid | 80.87 | 98.67 |
VIT_12s0178g00200.t01 | Wine grape | cytosol | 80.87 | 98.67 |
CDX85794 | Canola | cytosol | 75.65 | 98.58 |
CDY30296 | Canola | cytosol | 75.65 | 98.58 |
CDY31972 | Canola | cytosol | 75.65 | 98.58 |
CDY40061 | Canola | cytosol | 75.65 | 98.58 |
Bra028615.1-P | Field mustard | cytosol | 80.65 | 98.41 |
PGSC0003DMT400010174 | Potato | cytosol | 80.65 | 98.41 |
Solyc11g005330.1.1 | Tomato | nucleus | 80.65 | 98.41 |
Bra009081.1-P | Field mustard | cytosol | 75.43 | 98.3 |
CDX81140 | Canola | cytosol | 80.43 | 98.14 |
CDY56544 | Canola | cytosol | 80.43 | 98.14 |
VIT_08s0007g06520.t01 | Wine grape | cytosol | 80.43 | 98.14 |
Bra006033.1-P | Field mustard | cytosol | 80.22 | 97.88 |
GSMUA_Achr6P25350_001 | Banana | cytosol | 80.22 | 97.88 |
HORVU5Hr1G117900.1 | Barley | cytosol | 80.22 | 97.88 |
TraesCS5B01G124100.1 | Wheat | cytosol | 80.22 | 97.88 |
TraesCS5B01G516100.1 | Wheat | cytosol | 80.22 | 97.88 |
TraesCS5D01G516200.1 | Wheat | cytosol | 80.22 | 97.88 |
GSMUA_Achr9P08850_001 | Banana | cytosol | 74.13 | 97.71 |
GSMUA_Achr5P29190_001 | Banana | cytosol | 73.91 | 97.7 |
Os11t0163100-01 | Rice | nucleus, plasma membrane, plastid | 80.0 | 97.61 |
GSMUA_Achr9P03170_001 | Banana | cytosol | 79.78 | 97.61 |
TraesCS4A01G356100.2 | Wheat | cytosol | 80.22 | 97.36 |
GSMUA_Achr3P02960_001 | Banana | cytosol | 79.78 | 97.35 |
GSMUA_Achr8P16150_001 | Banana | cytosol | 79.78 | 97.35 |
EES08028 | Sorghum | cytosol | 79.57 | 97.08 |
GSMUA_Achr10P... | Banana | cytosol | 79.57 | 97.08 |
GSMUA_Achr2P16160_001 | Banana | cytosol | 79.57 | 97.08 |
KXG23031 | Sorghum | cytosol | 79.57 | 97.08 |
Os05t0106600-01 | Rice | nucleus | 79.57 | 97.08 |
VIT_06s0004g04570.t01 | Wine grape | cytosol | 79.35 | 97.07 |
GSMUA_Achr11P... | Banana | cytosol | 73.48 | 96.85 |
GSMUA_Achr8P02660_001 | Banana | cytosol | 79.35 | 96.82 |
KXG21029 | Sorghum | cytosol | 79.35 | 96.82 |
Os03t0836000-01 | Rice | plasma membrane, plastid | 79.35 | 96.82 |
Zm00001d011086_P005 | Maize | cytosol | 79.35 | 96.82 |
Zm00001d035720_P002 | Maize | cytosol | 79.35 | 96.82 |
Zm00001d053177_P004 | Maize | cytosol | 79.35 | 96.82 |
GSMUA_Achr6P34320_001 | Banana | cytosol | 51.3 | 96.72 |
GSMUA_Achr7P10410_001 | Banana | cytosol | 79.13 | 96.55 |
TraesCS1B01G024500.1 | Wheat | golgi, nucleus | 79.13 | 96.55 |
TraesCS1D01G020000.1 | Wheat | cytosol | 79.13 | 96.55 |
EER90564 | Sorghum | cytosol | 78.91 | 96.29 |
Os01t0964133-01 | Rice | plasma membrane | 78.7 | 96.02 |
VIT_13s0019g01240.t01 | Wine grape | cytosol | 78.7 | 96.02 |
Zm00001d019635_P001 | Maize | cytosol | 28.7 | 95.65 |
GSMUA_Achr11P... | Banana | cytosol | 78.26 | 95.49 |
Zm00001d035722_P007 | Maize | plasma membrane | 79.57 | 95.06 |
Zm00001d012277_P001 | Maize | cytosol | 77.17 | 94.41 |
TraesCS5D01G132200.1 | Wheat | golgi | 75.87 | 94.07 |
EES01810 | Sorghum | cytosol | 76.52 | 93.62 |
Os05t0438800-01 | Rice | plasma membrane, plastid | 76.09 | 93.09 |
Zm00001d042731_P002 | Maize | extracellular, plasma membrane, plastid | 76.09 | 93.09 |
HORVU1Hr1G074350.1 | Barley | cytosol | 75.87 | 92.82 |
TraesCS1A01G274400.1 | Wheat | golgi | 75.87 | 92.82 |
TraesCS1B01G283900.1 | Wheat | cytosol | 75.87 | 92.82 |
TraesCS1D01G274400.1 | Wheat | cytosol | 75.87 | 92.82 |
Zm00001d034761_P002 | Maize | cytosol | 78.91 | 92.6 |
Zm00001d016605_P001 | Maize | cytosol | 31.74 | 92.41 |
EES19603 | Sorghum | cytosol | 75.43 | 92.29 |
AT1G49240.1 | Thale cress | cytosol | 75.43 | 92.04 |
CDX82326 | Canola | cytosol | 75.43 | 92.04 |
Zm00001d010159_P002 | Maize | extracellular, plasma membrane | 75.22 | 92.02 |
Bra022356.1-P | Field mustard | cytosol | 64.57 | 91.95 |
CDX99315 | Canola | cytosol | 64.57 | 91.95 |
AT3G18780.3 | Thale cress | cytosol | 75.22 | 91.78 |
CDX92272 | Canola | cytosol | 75.22 | 91.78 |
CDX95498 | Canola | cytosol | 75.22 | 91.78 |
CDY18545 | Canola | cytosol | 75.22 | 91.78 |
CDY61982 | Canola | cytosol | 75.22 | 91.78 |
TraesCS5A01G124300.2 | Wheat | golgi | 81.52 | 91.69 |
CDX92271 | Canola | cytosol | 62.83 | 91.17 |
HORVU1Hr1G002840.6 | Barley | plasma membrane | 79.13 | 89.43 |
TraesCS1A01G020500.2 | Wheat | cytosol | 79.13 | 89.43 |
Zm00001d016508_P001 | Maize | cytosol | 25.87 | 86.23 |
GSMUA_Achr10P... | Banana | cytosol | 51.52 | 86.18 |
KXG21030 | Sorghum | cytosol | 71.74 | 84.83 |
Zm00001d008746_P001 | Maize | cytosol | 50.65 | 84.73 |
Bra037560.1-P | Field mustard | cytoskeleton, cytosol | 64.35 | 83.85 |
GSMUA_Achr2P08030_001 | Banana | cytosol | 63.7 | 83.71 |
Zm00001d011087_P001 | Maize | plastid | 82.17 | 83.26 |
Zm00001d019396_P001 | Maize | cytosol | 30.0 | 82.14 |
Zm00001d007792_P001 | Maize | cytosol | 45.43 | 79.17 |
HORVU5Hr1G039850.3 | Barley | mitochondrion | 77.17 | 76.34 |
Zm00001d003298_P001 | Maize | cytosol | 43.48 | 76.05 |
Zm00001d004087_P001 | Maize | cytosol | 33.91 | 72.22 |
Os01t0866100-01 | Rice | plasma membrane | 31.3 | 70.94 |
VIT_11s0016g00770.t01 | Wine grape | cytosol | 55.43 | 67.82 |
Zm00001d004855_P002 | Maize | cytoskeleton, cytosol, nucleus | 78.48 | 61.19 |
VIT_14s0068g01630.t01 | Wine grape | cytosol | 36.96 | 43.7 |
VIT_13s0064g00730.t01 | Wine grape | cytosol | 30.87 | 39.34 |
Zm00001d034421_P004 | Maize | plastid | 37.83 | 37.18 |
VIT_01s0137g00280.t01 | Wine grape | cytosol | 31.96 | 34.35 |
VIT_00s0214g00170.t01 | Wine grape | cytosol | 12.17 | 32.0 |
VIT_17s0000g04010.t01 | Wine grape | mitochondrion | 28.04 | 29.19 |
VIT_11s0016g05490.t01 | Wine grape | cytosol | 26.96 | 28.64 |
Protein Annotations
EntrezGene:100232866 | wikigene:100232866 | MapMan:20.2.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | ProteinID:AAK54158 |
ProteinID:AAK54158.1 | ProteinID:AAK54159 | ProteinID:AAK54159.1 | ProteinID:AAT80890 | ProteinID:AAT80890.1 | ProteinID:AAW31852 |
ProteinID:AAW31852.1 | EntrezGene:ACT1 | wikigene:ACT1 | ProteinID:ADP07946 | ProteinID:ADP07946.1 | EMBL:AF369524 |
EMBL:AF369525 | ProteinID:AFO85874 | ProteinID:AFO85874.1 | EMBL:AM465189 | EMBL:AY680701 | EMBL:AY847627 |
InterPro:Actin | InterPro:Actin/actin-like_CS | InterPro:Actin_CS | ProteinID:CAN77077 | ProteinID:CAN77077.1 | ProteinID:CCB60451 |
ProteinID:CCB60451.1 | UniProt:F6I0I5 | EMBL:FN596506 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005524 | EMBL:GU585869 | EMBL:JQ989220 | PFAM:PF00022 | PRINTS:PR00190 | ScanProsite:PS00406 |
ScanProsite:PS00432 | ScanProsite:PS01132 | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF358 | SMART:SM00268 | SUPFAM:SSF53067 |
TIGR:TC60835 | UniParc:UPI000210A58D | ArrayExpress:VIT_04s0044g00580 | EnsemblPlantsGene:VIT_04s0044g00580 | EnsemblPlants:VIT_04s0044g00580.t01 | unigene:Vvi.13769 |
unigene:Vvi.7514 | RefSeq:XP_002282516 | RefSeq:XP_002282516.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4:-:21427866..21431057
Molecular Weight (calculated)
51340.2 Da
IEP (calculated)
6.681
GRAVY (calculated)
-0.062
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: MILPHSFISL SFHLHFRTLS LLYIAPSHTL SLPHFIFPSL FPSLEREHPK PIVFGDWLGS LFLLRLRFSL LSVSAVFKRG NKRMADTEDI QPLVCDNGTG
101: MVKAGFAGDD APRAVFPSIV GRPRHTGVMV GMGQKDAYVG DEAQSKRGIL TLKYPIEHGI VSNWDDMEKI WHHTFYNELR VAPEEHPVLL TEAPLNPKAN
201: REKMTQIMFE TFNVPAMYVA IQAVLSLYAS GRTTGIVLDS GDGVSHTVPI YEGYALPHAI LRLDLAGRDL TDALMKILTE RGYMFTTTAE REIVRDMKEK
301: LAYVALDYEQ ELETAKSSSS VEKNYELPDG QVITIGAERF RCPEVLFQPS LIGMEAAGIH ETTYNSIMKC DVDIRKDLYG NIVLSGGSTM FPGIADRMSK
401: EITALAPSSM KIKVVAPPER KYSVWIGGSI LASLSTFQQM WISKGEYDES GPSIVHRKCF
101: MVKAGFAGDD APRAVFPSIV GRPRHTGVMV GMGQKDAYVG DEAQSKRGIL TLKYPIEHGI VSNWDDMEKI WHHTFYNELR VAPEEHPVLL TEAPLNPKAN
201: REKMTQIMFE TFNVPAMYVA IQAVLSLYAS GRTTGIVLDS GDGVSHTVPI YEGYALPHAI LRLDLAGRDL TDALMKILTE RGYMFTTTAE REIVRDMKEK
301: LAYVALDYEQ ELETAKSSSS VEKNYELPDG QVITIGAERF RCPEVLFQPS LIGMEAAGIH ETTYNSIMKC DVDIRKDLYG NIVLSGGSTM FPGIADRMSK
401: EITALAPSSM KIKVVAPPER KYSVWIGGSI LASLSTFQQM WISKGEYDES GPSIVHRKCF
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KSEYDESGPS IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KSEYDESGPS IVHRKCF
Arabidopsis Description
ACT7AtACT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UEW4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.