Factsheet for VIT_11s0016g00770.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g01240.t01	Wine grape	cytosol	67.82	67.64
VIT_08s0007g06520.t01	Wine grape	cytosol	67.55	67.37
VIT_12s0178g00200.t01	Wine grape	cytosol	67.55	67.37
VIT_06s0004g04570.t01	Wine grape	cytosol	67.29	67.29
VIT_04s0044g00580.t01	Wine grape	extracellular	67.82	55.43
VIT_14s0068g01630.t01	Wine grape	cytosol	43.09	41.65
VIT_13s0064g00730.t01	Wine grape	cytosol	35.11	36.57
VIT_00s0214g00170.t01	Wine grape	cytosol	15.69	33.71
VIT_01s0137g00280.t01	Wine grape	cytosol	38.03	33.41
VIT_17s0000g04010.t01	Wine grape	mitochondrion	34.31	29.19
VIT_11s0016g05490.t01	Wine grape	cytosol	30.59	26.56

Protein Annotations

EntrezGene:100266293	wikigene:100266293	MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin
InterPro:Actin/actin-like_CS	InterPro:Actin_CS	ProteinID:CBI27782	ProteinID:CBI27782.3	UniProt:D7TCC4	EMBL:FN595756
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EntrezGene:LOC100266293	wikigene:LOC100266293
PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS01132	PANTHER:PTHR11937	PANTHER:PTHR11937:SF204
SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI00015C9106	ArrayExpress:VIT_11s0016g00770	EnsemblPlantsGene:VIT_11s0016g00770	EnsemblPlants:VIT_11s0016g00770.t01
RefSeq:XP_002277323	RefSeq:XP_002277323.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr11:+:713295..714847

Molecular Weight (calculated)

42100.9 Da

IEP (calculated)

5.011

GRAVY (calculated)

-0.157

Length

376 amino acids

Sequence
(BLAST)

001: MDFDEKQAVV CDNGSGLVKA GFAGDDAPCV VFPSVIGWPR NKHAMIGIGQ KEMYLGDEAQ ARRGVLRLSY PINHGMVRDW EAMERLWQHT FEKELRVSIE
101: ERPVLLTEPP LNPKFNKEKM VEIMFEAFEI PATYVAIQAV LSLYASGRTT GIVMDSGEGV THVVPIYEGY ALPHAIQRLD LAGRDLTDYL TKILTEEGYV
201: FTTSADREIV KDIKEQTTYV AMDFEKELAT SRESLELDKQ YELPDGQVIT IGTGRFKCPE ILFDPSKVGI ESCGVHDIVL KSIRRCDMDI RRDMYGNVVL
301: SGGTTMVPGL ADRLAKELSS LAPPGVRVRV VAPPERKYSV WIGGSILASL STFEQMWIKK EEYMESGSSI VHMKCF

Best Arabidopsis Sequence Match ( AT2G37620.2 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.