Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 98.41 | 98.41 |
| GSMUA_Achr2P16160_001 | Banana | cytosol | 98.41 | 98.41 |
| TraesCS5B01G124100.1 | Wheat | cytosol | 98.41 | 98.41 |
| GSMUA_Achr9P03170_001 | Banana | cytosol | 98.14 | 98.4 |
| Os11t0163100-01 | Rice | nucleus, plasma membrane, plastid | 98.14 | 98.14 |
| GSMUA_Achr5P29190_001 | Banana | cytosol | 90.45 | 97.99 |
| GSMUA_Achr6P34320_001 | Banana | cytosol | 63.4 | 97.95 |
| TraesCS5B01G516100.1 | Wheat | cytosol | 97.88 | 97.88 |
| GSMUA_Achr8P02660_001 | Banana | cytosol | 97.88 | 97.88 |
| GSMUA_Achr7P10410_001 | Banana | cytosol | 97.88 | 97.88 |
| GSMUA_Achr6P25350_001 | Banana | cytosol | 97.88 | 97.88 |
| TraesCS5D01G516200.1 | Wheat | cytosol | 97.88 | 97.88 |
| VIT_08s0007g06520.t01 | Wine grape | cytosol | 97.88 | 97.88 |
| HORVU5Hr1G117900.1 | Barley | cytosol | 97.88 | 97.88 |
| KXG23031 | Sorghum | cytosol | 97.61 | 97.61 |
| Solyc01g104770.2.1 | Tomato | nucleus | 97.61 | 97.61 |
| Os05t0106600-01 | Rice | nucleus | 97.61 | 97.61 |
| GSMUA_Achr8P16150_001 | Banana | cytosol | 97.61 | 97.61 |
| GSMUA_Achr3P02960_001 | Banana | cytosol | 97.61 | 97.61 |
| EES08028 | Sorghum | cytosol | 97.61 | 97.61 |
| GSMUA_Achr9P08850_001 | Banana | cytosol | 90.19 | 97.42 |
| TraesCS4A01G356100.2 | Wheat | cytosol | 97.88 | 97.36 |
| Zm00001d011086_P005 | Maize | cytosol | 97.35 | 97.35 |
| Zm00001d035720_P002 | Maize | cytosol | 97.35 | 97.35 |
| KXG21029 | Sorghum | cytosol | 97.35 | 97.35 |
| Zm00001d053177_P004 | Maize | cytosol | 97.35 | 97.35 |
| TraesCS1D01G020000.1 | Wheat | cytosol | 97.08 | 97.08 |
| TraesCS1B01G024500.1 | Wheat | golgi, nucleus | 97.08 | 97.08 |
| VIT_06s0004g04570.t01 | Wine grape | cytosol | 96.82 | 97.07 |
| GSMUA_Achr11P... | Banana | cytosol | 89.66 | 96.85 |
| Os03t0836000-01 | Rice | plasma membrane, plastid | 96.82 | 96.82 |
| EER90564 | Sorghum | cytosol | 96.82 | 96.82 |
| Os01t0964133-01 | Rice | plasma membrane | 96.55 | 96.55 |
| GSMUA_Achr11P... | Banana | cytosol | 96.55 | 96.55 |
| Zm00001d019635_P001 | Maize | cytosol | 35.28 | 96.38 |
| PGSC0003DMT400076499 | Potato | cytosol | 49.34 | 96.37 |
| KRH10484 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 96.02 | 96.02 |
| KRH43946 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 96.02 | 96.02 |
| VIT_13s0019g01240.t01 | Wine grape | cytosol | 96.02 | 96.02 |
| Zm00001d035722_P007 | Maize | plasma membrane | 97.35 | 95.32 |
| Zm00001d012277_P001 | Maize | cytosol | 94.43 | 94.68 |
| TraesCS5D01G132200.1 | Wheat | golgi | 92.84 | 94.34 |
| EES01810 | Sorghum | cytosol | 93.9 | 94.15 |
| Zm00001d042731_P002 | Maize | extracellular, plasma membrane, plastid | 93.37 | 93.62 |
| Os05t0438800-01 | Rice | plasma membrane, plastid | 93.1 | 93.35 |
| Zm00001d034761_P002 | Maize | cytosol | 96.82 | 93.11 |
| HORVU1Hr1G074350.1 | Barley | cytosol | 92.84 | 93.09 |
| TraesCS1D01G274400.1 | Wheat | cytosol | 92.84 | 93.09 |
| TraesCS1A01G274400.1 | Wheat | golgi | 92.84 | 93.09 |
| TraesCS1B01G283900.1 | Wheat | cytosol | 92.84 | 93.09 |
| EES19603 | Sorghum | cytosol | 92.31 | 92.55 |
| Zm00001d016605_P001 | Maize | cytosol | 38.73 | 92.41 |
| Zm00001d010159_P002 | Maize | extracellular, plasma membrane | 92.04 | 92.29 |
| TraesCS5A01G124300.2 | Wheat | golgi | 98.41 | 90.71 |
| PGSC0003DMT400076501 | Potato | cytosol | 47.75 | 90.0 |
| HORVU1Hr1G002840.6 | Barley | plasma membrane | 97.08 | 89.93 |
| TraesCS1A01G020500.2 | Wheat | cytosol | 97.08 | 89.93 |
| GSMUA_Achr10P... | Banana | cytosol | 63.66 | 87.27 |
| Zm00001d016508_P001 | Maize | cytosol | 31.57 | 86.23 |
| Zm00001d008746_P001 | Maize | cytosol | 62.07 | 85.09 |
| KXG21030 | Sorghum | cytosol | 87.53 | 84.83 |
| GSMUA_Achr2P08030_001 | Banana | cytosol | 77.98 | 84.0 |
| Zm00001d019396_P001 | Maize | cytosol | 36.6 | 82.14 |
| VIT_04s0044g00580.t01 | Wine grape | extracellular | 98.67 | 80.87 |
| Zm00001d011087_P001 | Maize | plastid | 97.35 | 80.84 |
| Zm00001d007792_P001 | Maize | cytosol | 55.7 | 79.55 |
| Zm00001d003298_P001 | Maize | cytosol | 53.58 | 76.81 |
| HORVU5Hr1G039850.3 | Barley | mitochondrion | 94.43 | 76.56 |
| Zm00001d004087_P001 | Maize | cytosol | 41.64 | 72.69 |
| Os01t0866100-01 | Rice | plasma membrane | 37.93 | 70.44 |
| VIT_11s0016g00770.t01 | Wine grape | cytosol | 67.37 | 67.55 |
| Zm00001d004855_P002 | Maize | cytoskeleton, cytosol, nucleus | 96.02 | 61.36 |
| VIT_14s0068g01630.t01 | Wine grape | cytosol | 45.09 | 43.7 |
| VIT_13s0064g00730.t01 | Wine grape | cytosol | 37.4 | 39.06 |
| Zm00001d034421_P004 | Maize | plastid | 45.89 | 36.97 |
| VIT_01s0137g00280.t01 | Wine grape | cytosol | 38.99 | 34.35 |
| VIT_00s0214g00170.t01 | Wine grape | cytosol | 14.85 | 32.0 |
| VIT_17s0000g04010.t01 | Wine grape | mitochondrion | 34.22 | 29.19 |
| VIT_11s0016g05490.t01 | Wine grape | cytosol | 33.16 | 28.87 |
Protein Annotations
| EntrezGene:100246825 | wikigene:100246825 | MapMan:20.2.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | InterPro:Actin |
| InterPro:Actin/actin-like_CS | InterPro:Actin_CS | ProteinID:CCB52806 | ProteinID:CCB52806.1 | UniProt:F6HJM9 | EMBL:FN595785 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005524 | EntrezGene:LOC100246825 | wikigene:LOC100246825 |
| PFAM:PF00022 | PRINTS:PR00190 | ScanProsite:PS00406 | ScanProsite:PS00432 | ScanProsite:PS01132 | PANTHER:PTHR11937 |
| PANTHER:PTHR11937:SF355 | SMART:SM00268 | SUPFAM:SSF53067 | TIGR:TC67392 | UniParc:UPI00015CB8D5 | ArrayExpress:VIT_12s0178g00200 |
| EnsemblPlantsGene:VIT_12s0178g00200 | EnsemblPlants:VIT_12s0178g00200.t01 | unigene:Vvi.17160 | unigene:Vvi.6704 | RefSeq:XP_002265476 | RefSeq:XP_002265476.1 |
| RefSeq:XP_010657405.1 | RefSeq:XP_019079135.1 | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:8678865..8680701
Molecular Weight (calculated)
41595.0 Da
IEP (calculated)
5.162
GRAVY (calculated)
-0.150
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDMKEKLAY VALDYEQELE TAKSSSAVEK SYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KGEYDESGPA IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDMKEKLAY VALDYEQELE TAKSSSAVEK SYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KGEYDESGPA IVHRKCF
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KSEYDESGPS IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KSEYDESGPS IVHRKCF
Arabidopsis Description
ACT7AtACT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UEW4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.