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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • nucleus 1
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:cytosol
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P09160_001
GSMUA_Achr2P08030_001
GSMUA_Achr2P16160_001
GSMUA_Achr3P02960_001
GSMUA_Achr3P20980_001
GSMUA_Achr3P26270_001
GSMUA_Achr5P29190_001
GSMUA_Achr6P25350_001
GSMUA_Achr6P34320_001
GSMUA_Achr7P10410_001
GSMUA_Achr7P18630_001
GSMUA_Achr7P24000_001
GSMUA_Achr8P02660_001
GSMUA_Achr8P05700_001
GSMUA_Achr8P16150_001
GSMUA_Achr9P03170_001
GSMUA_Achr9P08850_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49240.1 GSMUA_Achr3P26270_001 AT1G72770.1 19033529
AT1G49240.1 GSMUA_Achr7P24000_001 AT1G72770.1 19033529
AT1G49240.1 GSMUA_Achr8P05700_001 AT1G72770.1 19033529
AT5G09810.1 GSMUA_Achr1P09160_001 AT2G31200.1 21798944
AT5G09810.1 GSMUA_Achr10P... AT2G37620.1 21798944
AT5G09810.1 GSMUA_Achr7P18630_001 AT2G37620.1 21798944
AT5G09810.1 GSMUA_AchrUn_... AT2G37620.1 21798944
AT5G09810.1 GSMUA_Achr10P... AT3G12110.1 21798944
AT5G09810.1 GSMUA_Achr7P18630_001 AT3G12110.1 21798944
AT5G09810.1 GSMUA_AchrUn_... AT3G12110.1 21798944
AT5G09810.1 GSMUA_Achr10P... AT3G18060.1 21798944
AT5G09810.1 GSMUA_Achr3P20980_001 AT3G18060.1 21798944
AT5G09810.1 GSMUA_Achr10P... AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr10P... AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr11P... AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr11P... AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr2P08030_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr2P16160_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr3P02960_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr5P29190_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr6P25350_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr6P34320_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr7P10410_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr8P02660_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr8P16150_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr9P03170_001 AT5G09810.1 21798944
AT5G09810.1 GSMUA_Achr9P08850_001 AT5G09810.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P29190_001 Banana cytosol 98.28 98.56
GSMUA_Achr3P20240_001 Banana cytosol 83.67 97.33
GSMUA_Achr11P... Banana cytosol 97.13 97.13
GSMUA_Achr6P02480_001 Banana cytosol 82.23 96.63
GSMUA_Achr10P... Banana cytosol 72.49 96.2
GSMUA_Achr2P15150_001 Banana cytosol 95.42 95.42
PGSC0003DMT400076499 Potato cytosol 52.72 95.34
GSMUA_Achr7P18630_001 Banana cytosol 84.53 92.19
GSMUA_Achr6P25350_001 Banana cytosol 99.14 91.78
GSMUA_Achr10P... Banana cytosol 97.99 90.72
HORVU5Hr1G117900.1 Barley cytosol 97.99 90.72
TraesCS5D01G516200.1 Wheat cytosol 97.99 90.72
TraesCS5B01G516100.1 Wheat cytosol 97.99 90.72
GSMUA_Achr2P16160_001 Banana cytosol 97.99 90.72
GSMUA_Achr8P16150_001 Banana cytosol 97.99 90.72
GSMUA_Achr9P03170_001 Banana cytosol 97.71 90.69
GSMUA_AchrUn_... Banana plasma membrane 97.71 90.45
GSMUA_Achr8P02660_001 Banana cytosol 97.71 90.45
TraesCS4A01G356100.2 Wheat cytosol 97.99 90.24
GSMUA_Achr3P02960_001 Banana cytosol 97.42 90.19
GSMUA_Achr7P10410_001 Banana cytosol 97.42 90.19
Os03t0836000-01 Rice plasma membrane, plastid 97.42 90.19
CDY21607 Canola cytosol 97.42 90.19
VIT_12s0178g00200.t01 Wine grape cytosol 97.42 90.19
AT5G09810.1 Thale cress cytosol 97.42 90.19
CDX69885 Canola cytosol 97.42 90.19
Solyc03g078400.2.1 Tomato nucleus, plastid 97.13 89.92
PGSC0003DMT400047481 Potato cytosol 97.13 89.92
Bra028615.1-P Field mustard cytosol 97.13 89.92
Solyc11g005330.1.1 Tomato nucleus 96.85 89.66
KRH64098 Soybean cytosol 96.85 89.66
KRH59535 Soybean cytosol 96.85 89.66
PGSC0003DMT400010174 Potato cytosol 96.85 89.66
CDX81140 Canola cytosol 96.85 89.66
CDY56544 Canola cytosol 96.85 89.66
KRH43389 Soybean cytosol 96.85 89.66
CDY40061 Canola cytosol 90.54 89.52
CDY31972 Canola cytosol 90.54 89.52
CDY30296 Canola cytosol 90.54 89.52
CDX85794 Canola cytosol 90.54 89.52
GSMUA_Achr1P05990_001 Banana plasma membrane 96.56 89.39
Bra006033.1-P Field mustard cytosol 96.56 89.39
GSMUA_Achr11P... Banana cytosol 96.56 89.39
Bra009081.1-P Field mustard cytosol 90.26 89.24
EER90564 Sorghum cytosol 96.28 89.12
Solyc01g104770.2.1 Tomato nucleus 95.99 88.86
GSMUA_Achr4P31250_001 Banana cytosol 95.7 88.59
KRH53856 Soybean endoplasmic reticulum, mitochondrion 84.24 88.55
GSMUA_Achr10P... Banana cytosol 82.81 87.84
GSMUA_Achr1P20200_001 Banana cytosol 87.11 87.61
Zm00001d012277_P001 Maize cytosol 94.27 87.5
Zm00001d016508_P001 Maize cytosol 34.38 86.96
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 93.7 86.74
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 93.7 86.74
EES01810 Sorghum cytosol 93.41 86.7
GSMUA_Achr6P34320_001 Banana cytosol 60.46 86.48
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 92.84 86.17
Zm00001d034761_P002 Maize cytosol 96.56 85.97
Os05t0438800-01 Rice plasma membrane, plastid 92.26 85.64
TraesCS1A01G274400.1 Wheat golgi 91.98 85.37
TraesCS1B01G283900.1 Wheat cytosol 91.98 85.37
TraesCS1D01G274400.1 Wheat cytosol 91.98 85.37
HORVU1Hr1G074350.1 Barley cytosol 91.98 85.37
Solyc04g071260.2.1 Tomato plastid 91.98 85.15
AT1G49240.1 Thale cress cytosol 91.69 84.88
EES19603 Sorghum cytosol 91.4 84.84
AT3G18780.3 Thale cress cytosol 91.4 84.62
CDX92272 Canola cytosol 91.4 84.62
CDX95498 Canola cytosol 91.4 84.62
CDY18545 Canola cytosol 91.4 84.62
CDY61982 Canola cytosol 91.4 84.62
Zm00001d010159_P002 Maize extracellular, plasma membrane 91.12 84.57
CDX82326 Canola cytosol 91.12 84.35
CDX99315 Canola cytosol 77.36 83.59
Bra022356.1-P Field mustard cytosol 76.79 82.97
Zm00001d019396_P001 Maize cytosol 39.83 82.74
CDX92271 Canola cytosol 75.07 82.65
GSMUA_Achr10P... Banana cytosol 63.61 80.73
GSMUA_Achr2P08030_001 Banana cytosol 77.94 77.71
Zm00001d007792_P001 Maize cytosol 57.88 76.52
Bra037560.1-P Field mustard cytoskeleton, cytosol 76.79 75.92
Zm00001d008746_P001 Maize cytosol 59.31 75.27
PGSC0003DMT400076501 Potato cytosol 42.69 74.5
VIT_04s0044g00580.t01 Wine grape extracellular 97.71 74.13
PGSC0003DMT400087294 Potato mitochondrion 55.87 71.17
PGSC0003DMT400022210 Potato cytosol 68.48 64.95
PGSC0003DMT400022205 Potato cytosol 67.05 63.93
PGSC0003DMT400074882 Potato cytosol 67.34 63.51
PGSC0003DMT400088088 Potato cytosol 34.1 61.34
PGSC0003DMT400074887 Potato cytosol 64.18 60.54
GSMUA_AchrUn_... Banana cytosol 44.41 39.85
GSMUA_Achr2P05970_001 Banana cytosol 17.48 34.46
GSMUA_AchrUn_... Banana endoplasmic reticulum 26.65 31.96
GSMUA_Achr8P01270_001 Banana cytosol 38.68 31.62
GSMUA_Achr9P07630_001 Banana cytosol 38.4 31.31
GSMUA_Achr8P16860_001 Banana endoplasmic reticulum 42.12 31.08
GSMUA_Achr6P21120_001 Banana cytosol 37.82 30.91
GSMUA_Achr2P05960_001 Banana cytosol 23.21 26.47
GSMUA_AchrUn_... Banana cytosol 32.09 25.75
Protein Annotations
Gene3D:2.30.36.70MapMan:20.2.1Gene3D:3.30.420.40InterPro:ActinInterPro:Actin/actin-like_CSInterPro:Actin_CS
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:GSMUA_Achr9G08850_001EnsemblPlants:GSMUA_Achr9P08850_001
EnsemblPlants:GSMUA_Achr9T08850_001UniProt:M0TYP4PFAM:PF00022PRINTS:PR00190ScanProsite:PS00406ScanProsite:PS00432
ScanProsite:PS01132PANTHER:PTHR11937PANTHER:PTHR11937:SF252SMART:SM00268SUPFAM:SSF53067UniParc:UPI0002950A0A
Description
Actin [Source:GMGC_GENE;Acc:GSMUA_Achr9G08850_001]
Coordinates
chr9:+:5698371..5700640
Molecular Weight (calculated)
38430.2 Da
IEP (calculated)
5.429
GRAVY (calculated)
-0.160
Length
349 amino acids
Sequence
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLAY VALDYEQELE SAKTSSSPSL IGMEAAGIHE TTYNSIMKCD VDIRKDLYGN IVLSGGTTMF PGIADRMSKE ITALAPSSMK
301: IKVVAPPERK YSVWIGGSIL ASLSTFQQMW ISKGEYEESG PSIVHRKCF
Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.