Factsheet for GSMUA_Achr10P25960_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P20240_001	Banana	cytosol	81.76	89.67
GSMUA_Achr6P02480_001	Banana	cytosol	80.55	89.23
GSMUA_Achr10P...	Banana	cytosol	70.82	88.59
Os12t0163700-01	Rice	plastid	94.22	85.4
GSMUA_Achr2P15150_001	Banana	cytosol	89.97	84.81
GSMUA_Achr4P31250_001	Banana	cytosol	96.96	84.62
GSMUA_Achr6P34320_001	Banana	cytosol	62.61	84.43
GSMUA_AchrUn_...	Banana	plasma membrane	96.66	84.35
GSMUA_Achr1P20200_001	Banana	cytosol	88.15	83.57
TraesCS5D01G000400.1	Wheat	cytosol	95.74	83.55
TraesCS5A01G000400.1	Wheat	golgi	95.74	83.55
GSMUA_Achr9P08850_001	Banana	cytosol	87.84	82.81
GSMUA_Achr10P...	Banana	cytosol	94.83	82.76
GSMUA_Achr8P02660_001	Banana	cytosol	94.83	82.76
GSMUA_Achr3P02960_001	Banana	cytosol	94.83	82.76
GSMUA_Achr2P16160_001	Banana	cytosol	94.83	82.76
GSMUA_Achr9P03170_001	Banana	cytosol	94.53	82.71
GSMUA_Achr6P25350_001	Banana	cytosol	94.53	82.49
GSMUA_Achr8P16150_001	Banana	cytosol	94.53	82.49
GSMUA_Achr5P29190_001	Banana	cytosol	87.23	82.47
GSMUA_Achr11P...	Banana	cytosol	87.23	82.23
GSMUA_Achr1P05990_001	Banana	plasma membrane	94.22	82.23
GSMUA_Achr7P10410_001	Banana	cytosol	94.22	82.23
TraesCSU01G270700.1	Wheat	cytosol	46.2	81.72
GSMUA_Achr11P...	Banana	cytosol	93.01	81.17
GSMUA_Achr10P...	Banana	cytosol	66.87	80.0
TraesCS3A01G377300.1	Wheat	cytosol	91.19	79.79
GSMUA_Achr7P18630_001	Banana	cytosol	76.6	78.75
HORVU5Hr1G000180.1	Barley	cytosol, nucleus	95.74	77.02
GSMUA_Achr2P08030_001	Banana	cytosol	80.24	75.43
HORVU3Hr1G083380.1	Barley	cytosol	87.23	73.59
TraesCS3D01G370400.3	Wheat	plastid	87.84	70.66
TraesCS3B01G410000.1	Wheat	cytosol	86.63	70.54
GSMUA_AchrUn_...	Banana	cytosol	45.29	38.3
GSMUA_Achr8P01270_001	Banana	cytosol	40.43	31.15
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	27.36	30.93
GSMUA_Achr9P07630_001	Banana	cytosol	39.82	30.61
GSMUA_Achr6P21120_001	Banana	cytosol	39.51	30.45
GSMUA_Achr8P16860_001	Banana	endoplasmic reticulum	42.55	29.6
GSMUA_Achr2P05970_001	Banana	cytosol	15.5	28.81
GSMUA_Achr2P05960_001	Banana	cytosol	25.23	27.12
GSMUA_AchrUn_...	Banana	cytosol	33.13	25.06

Protein Annotations

EnsemblPlants:GSMUA_Achr10P25960_001	EnsemblPlants:GSMUA_Achr10T25960_001	EnsemblPlantsGene:GSMUA_Achr10G25960_001	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin
InterPro:Actin_CS	PANTHER:PTHR11937	PANTHER:PTHR11937:SF355	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406
ScanProsite:PS00432	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI0002969DCC	UniProt:M0RLH0	MapMan:35.1

Description

Actin-3 [Source:GMGC_GENE;Acc:GSMUA_Achr10G25960_001]

Coordinates

chr10:-:29730827..29732400

Molecular Weight (calculated)

36379.8 Da

IEP (calculated)

5.250

GRAVY (calculated)

-0.147

Length

329 amino acids

Sequence
(BLAST)

001: MAEGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFFNELRMTQ
101: IMFETFNAPA MYVAIQAVLS LYASGRTTGI VLDSGDGVSH TVPIYEGYAL PHAILRLDLA GRDLTDNLMK ILTERGYSFT TTAEREIVRD MKEKLAYIAL
201: DYQQEMEAAK TASAVEKTYE LPDGQVITIG AERFRCPECD VDIRKDLYGN IVLSGGSTMF PGIADRMSKE ITALAPSSMK IKVVAPPERK YSVWIGGSIL
301: ASLSTFQQMW IAKAEYDESG PSIVHRKCF

Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.