Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P02480_001 | Banana | cytosol | 89.67 | 90.57 |
| GSMUA_Achr10P... | Banana | cytosol | 78.0 | 88.97 |
| GSMUA_Achr6P34320_001 | Banana | cytosol | 69.0 | 84.84 |
| GSMUA_Achr9P08850_001 | Banana | cytosol | 97.33 | 83.67 |
| GSMUA_Achr2P15150_001 | Banana | cytosol | 97.0 | 83.38 |
| GSMUA_Achr5P29190_001 | Banana | cytosol | 96.33 | 83.05 |
| GSMUA_Achr11P... | Banana | cytosol | 96.0 | 82.52 |
| GSMUA_Achr10P... | Banana | cytosol | 89.67 | 81.76 |
| TraesCSU01G270700.1 | Wheat | cytosol | 49.67 | 80.11 |
| Os12t0163700-01 | Rice | plastid | 96.33 | 79.61 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 100.0 | 79.58 |
| GSMUA_Achr7P18630_001 | Banana | cytosol | 84.67 | 79.38 |
| GSMUA_Achr3P02960_001 | Banana | cytosol | 97.33 | 77.45 |
| GSMUA_Achr4P31250_001 | Banana | cytosol | 97.33 | 77.45 |
| GSMUA_Achr6P25350_001 | Banana | cytosol | 97.0 | 77.19 |
| GSMUA_Achr8P16150_001 | Banana | cytosol | 97.0 | 77.19 |
| GSMUA_Achr8P02660_001 | Banana | cytosol | 97.0 | 77.19 |
| GSMUA_Achr10P... | Banana | cytosol | 96.67 | 76.92 |
| GSMUA_Achr9P03170_001 | Banana | cytosol | 96.33 | 76.86 |
| TraesCS5D01G000400.1 | Wheat | cytosol | 96.33 | 76.66 |
| GSMUA_Achr2P16160_001 | Banana | cytosol | 96.33 | 76.66 |
| TraesCS5A01G000400.1 | Wheat | golgi | 96.33 | 76.66 |
| GSMUA_Achr7P10410_001 | Banana | cytosol | 95.67 | 76.13 |
| GSMUA_Achr1P20200_001 | Banana | cytosol | 88.0 | 76.08 |
| GSMUA_Achr1P05990_001 | Banana | plasma membrane | 95.0 | 75.6 |
| GSMUA_Achr11P... | Banana | cytosol | 94.33 | 75.07 |
| TraesCS3A01G377300.1 | Wheat | cytosol | 91.33 | 72.87 |
| HORVU5Hr1G000180.1 | Barley | cytosol, nucleus | 96.33 | 70.66 |
| HORVU3Hr1G083380.1 | Barley | cytosol | 87.0 | 66.92 |
| GSMUA_Achr10P... | Banana | cytosol | 60.67 | 66.18 |
| GSMUA_Achr2P08030_001 | Banana | cytosol | 76.33 | 65.43 |
| TraesCS3B01G410000.1 | Wheat | cytosol | 87.0 | 64.6 |
| TraesCS3D01G370400.3 | Wheat | plastid | 87.67 | 64.3 |
| GSMUA_AchrUn_... | Banana | cytosol | 45.33 | 34.96 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 29.0 | 29.9 |
| GSMUA_Achr8P01270_001 | Banana | cytosol | 39.33 | 27.63 |
| GSMUA_Achr9P07630_001 | Banana | cytosol | 39.33 | 27.57 |
| GSMUA_Achr6P21120_001 | Banana | cytosol | 39.0 | 27.4 |
| GSMUA_Achr8P16860_001 | Banana | endoplasmic reticulum | 42.0 | 26.64 |
| GSMUA_Achr2P05970_001 | Banana | cytosol | 15.0 | 25.42 |
| GSMUA_Achr2P05960_001 | Banana | cytosol | 25.67 | 25.16 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.67 | 22.53 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P20240_001 | EnsemblPlants:GSMUA_Achr3T20240_001 | EnsemblPlantsGene:GSMUA_Achr3G20240_001 | Gene3D:3.30.420.40 | Gene3D:3.30.420.520 | Gene3D:3.90.640.10 |
| InterPro:Actin | InterPro:Actin_CS | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF355 | PFAM:PF00022 | ScanProsite:PS00432 |
| SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI000296E992 | UniProt:M0SG90 | MapMan:35.1 | : |
Description
Actin [Source:GMGC_GENE;Acc:GSMUA_Achr3G20240_001]
Coordinates
chr3:-:21439912..21441617
Molecular Weight (calculated)
33121.8 Da
IEP (calculated)
5.191
GRAVY (calculated)
-0.094
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGYPIEHG IVSNWDDMEK IWHHTFYNEL RMTQIMFETF NAPAMYVAIQ AVLSLYASGR
101: TTGIVLDSGD GVSHTVPIYE GYALPHAILR LDLAGRDLTD ALMKILTERG YSFTTTAERE IVRDIKEKLA YIALDYEQEL EMAKTSSSPS MIGMEAAGIH
201: ETTYNSIMKC DVDIRKDLYG NIVLSGGSTM FPGIADRMSK EITALAPSSM KIKVVAPPER KYSVWIGGSI LASLSTFQQM WIAKAEYDES GPSIVHRKCF
101: TTGIVLDSGD GVSHTVPIYE GYALPHAILR LDLAGRDLTD ALMKILTERG YSFTTTAERE IVRDIKEKLA YIALDYEQEL EMAKTSSSPS MIGMEAAGIH
201: ETTYNSIMKC DVDIRKDLYG NIVLSGGSTM FPGIADRMSK EITALAPSSM KIKVVAPPER KYSVWIGGSI LASLSTFQQM WIAKAEYDES GPSIVHRKCF
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.