Factsheet for HORVU3Hr1G083380.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G377300.1	Wheat	cytosol	91.79	95.21
TraesCS3D01G370400.3	Wheat	plastid	94.87	90.46
GSMUA_Achr4P31250_001	Banana	cytosol	85.64	88.59
HORVU5Hr1G117900.1	Barley	cytosol	85.64	88.59
HORVU1Hr1G074350.1	Barley	cytosol	85.38	88.56
HORVU1Hr1G047440.2	Barley	cytosol	85.13	88.06
GSMUA_Achr6P02480_001	Banana	cytosol	66.92	87.88
GSMUA_Achr2P15150_001	Banana	cytosol	78.21	87.39
Os12t0163700-01	Rice	plastid	81.28	87.33
GSMUA_Achr10P...	Banana	cytosol	73.59	87.23
GSMUA_Achr3P20240_001	Banana	cytosol	66.92	87.0
TraesCS3B01G410000.1	Wheat	cytosol	87.69	84.65
HORVU1Hr1G002840.6	Barley	plasma membrane	85.13	81.57
HORVU4Hr1G008310.9	Barley	cytosol	84.1	80.59
HORVU5Hr1G000180.1	Barley	cytosol, nucleus	84.36	80.44
HORVU5Hr1G039850.3	Barley	mitochondrion	88.97	74.62
HORVU4Hr1G007240.3	Barley	cytosol	39.23	32.62
HORVU6Hr1G053910.4	Barley	cytosol	35.13	31.0
HORVU6Hr1G032610.8	Barley	cytosol	37.95	30.77
HORVU7Hr1G074460.5	Barley	cytosol	33.85	30.28
HORVU5Hr1G088030.1	Barley	plastid	38.97	29.92
HORVU5Hr1G102220.2	Barley	plastid	31.28	27.85
HORVU0Hr1G005770.1	Barley	cytosol	30.26	27.44

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	UniProt:A0A287LZW3	InterPro:Actin	InterPro:Actin/actin-like_CS
InterPro:Actin_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	EnsemblPlantsGene:HORVU3Hr1G083380
EnsemblPlants:HORVU3Hr1G083380.1	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432	ScanProsite:PS01132
PANTHER:PTHR11937	PANTHER:PTHR11937:SF205	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000B46A77E	:

Description

No Description!

Coordinates

chrchr3H:+:603218655..603221171

Molecular Weight (calculated)

43385.3 Da

IEP (calculated)

6.430

GRAVY (calculated)

-0.221

Length

390 amino acids

Sequence
(BLAST)

001: NSVNAPTPRK ALEKWPKRMS SRLCVTMAPE WSRAGFAGDD APRAVFPSIV GRPRHTGVMV GMGQKDAYVG DEAQSKRGIL TLKYPIEHGV VGNWDDMEKI
101: WHHTFYNELR VAPEEHPVLL TEAPMNPKAN REKMTQIMFE TFNCPAMYVA IQAVLSLYAS GRTTGIVMDS GDGVSHTVPI YEGFTLPHAI IRLDLAGRDL
201: TDGLMKIMTE RGYSFTTTAE REIVRDIKEK LAYVALDYEQ ELETARTSSA VEKNYELPDG QVITIGAERF RCPEVLFQPS MIGMEAAGIH EATYNSIMKC
301: DVDIRKDLYG NVVLSGGSTM FPGIADRMNK EITALAPSSM RVKVVAPPER KYSVWIGGSI LASLSTFQQM WISKAEYDEA GPSIVHMKCF

Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.