Factsheet for TraesCS3D01G370400.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G377300.1	Wheat	cytosol	88.26	96.01
HORVU3Hr1G083380.1	Barley	cytosol	90.46	94.87
GSMUA_Achr4P31250_001	Banana	cytosol	82.4	89.39
TraesCS1D01G274400.1	Wheat	cytosol	82.15	89.36
TraesCS5D01G516200.1	Wheat	cytosol	82.15	89.12
TraesCS1D01G020000.1	Wheat	cytosol	81.66	88.59
TraesCS1D01G177400.1	Wheat	cytosol	81.66	88.59
GSMUA_Achr6P02480_001	Banana	cytosol	64.3	88.55
GSMUA_Achr2P15150_001	Banana	cytosol	75.06	87.97
Os12t0163700-01	Rice	plastid	78.0	87.88
GSMUA_Achr10P...	Banana	cytosol	70.66	87.84
TraesCS5D01G000400.1	Wheat	cytosol	80.93	87.8
GSMUA_Achr3P20240_001	Banana	cytosol	64.3	87.67
TraesCS5D01G132200.1	Wheat	golgi	78.0	85.98
TraesCS3B01G410000.1	Wheat	cytosol	84.35	85.4
TraesCS4D01G050800.2	Wheat	cytosol	76.53	80.26
TraesCS3D01G362400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.63	40.62
TraesCS5D01G364800.1	Wheat	cytosol	37.41	34.54
TraesCS6D01G149800.1	Wheat	cytosol	36.67	33.86
TraesCS5D01G429200.1	Wheat	cytosol	29.34	33.15
TraesCS6D01G194100.1	Wheat	cytosol	33.25	31.85
TraesCS7D01G308200.1	Wheat	cytosol	32.52	29.49
TraesCS2D01G600800.1	Wheat	cytosol	29.1	27.67

Protein Annotations

EnsemblPlants:TraesCS3D01G370400.3	EnsemblPlantsGene:TraesCS3D01G370400	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Actin/actin-like_CS
InterPro:Actin_CS	PANTHER:PTHR11937	PANTHER:PTHR11937:SF205	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406
ScanProsite:PS00432	ScanProsite:PS01132	SMART:SM00268	SUPFAM:SSF53067	TIGR:cd00012	MapMan:20.2.1

Description

No Description!

Coordinates

chr3D:+:484287370..484288691

Molecular Weight (calculated)

45416.9 Da

IEP (calculated)

6.015

GRAVY (calculated)

-0.101

Length

409 amino acids

Sequence
(BLAST)

001: MSSPLCATMA PEWSRSVTLS WCQSQIQLAC CLPVVTFQRE LIIHPSIRAK LQAGFAGDDA PRAVFPSIVG RPRHTGVMVG MGQKDAYVGD EAQSKRGILT
101: LKYPIEHGVV GNWDDMEKIW HHTFYNELRV APEEHPVLLT EAPMNPKANR EKMTQIMFET FNCPAMYVAI QAVLSLYASG RTTGIVMDSG DGVSHTVPIY
201: EGFTLPHAII RLDLAGRDLT DGLMKIMTER GYSFTTTAER EIVRDIKEKL AYVALDYEQE LETARTSSAV EKNYELPDGQ VITIGAERFR CPEVLFQPSM
301: IGMEAAGIHE ATYNSIMKCD VDIRKDLYGN VVLSGGSTMF PGIADRMNKE ITALAPSSMR VKVVAPPERK YSVWIGGSIL ASLSTFQQMW ISKAEYDEAG
401: PSIVHMKCF

Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.