Factsheet for TraesCS5D01G429200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G420600.1	Wheat	cytosol, nucleus	98.89	98.89
TraesCS5B01G422700.1	Wheat	cytosol	98.62	98.62
Os03t0783000-01	Rice	cytosol, nucleus	89.78	90.28
EER91551	Sorghum	cytosol	89.5	90.0
HORVU5Hr1G102220.2	Barley	plastid	98.07	81.05
Zm00001d014112_P003	Maize	cytosol	88.12	77.24
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	60.22	74.91
VIT_13s0064g00730.t01	Wine grape	cytosol	74.59	74.79
CDY56730	Canola	cytosol	73.2	73.61
Bra003429.1-P	Field mustard	cytosol	72.65	73.06
CDX67843	Canola	cytosol	72.38	72.78
CDY62715	Canola	cytosol	72.65	72.45
AT3G60830.1	Thale cress	cytosol	72.38	72.18
KRH32953	Soybean	cytosol	71.55	71.75
CDX71774	Canola	cytosol	70.44	71.43
PGSC0003DMT400019210	Potato	cytosol	70.99	71.39
Solyc11g008500.1.1	Tomato	cytosol, nucleus	70.99	71.39
KRH13968	Soybean	cytosol, nucleus	70.17	70.36
KRH23861	Soybean	cytosol, nucleus	69.89	70.08
KRH39934	Soybean	cytosol	62.71	68.79
VIT_00s0214g00170.t01	Wine grape	cytosol	32.04	66.29
CDY52344	Canola	cytosol	71.55	64.27
Bra007566.1-P	Field mustard	cytosol	54.14	59.76
TraesCS5D01G516200.1	Wheat	cytosol	35.08	33.69
TraesCS5D01G000400.1	Wheat	cytosol	34.81	33.42
TraesCS1D01G020000.1	Wheat	cytosol	34.81	33.42
TraesCS1D01G177400.1	Wheat	cytosol	33.98	32.63
TraesCS1D01G274400.1	Wheat	cytosol	32.87	31.65
TraesCS5D01G132200.1	Wheat	golgi	31.22	30.46
TraesCS3D01G370400.3	Wheat	plastid	33.15	29.34
TraesCS4D01G050800.2	Wheat	cytosol	31.22	28.97
TraesCS3D01G362400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.35	25.45
TraesCS5D01G364800.1	Wheat	cytosol	26.52	21.67
TraesCS6D01G194100.1	Wheat	cytosol	25.41	21.55
TraesCS6D01G149800.1	Wheat	cytosol	26.24	21.44
TraesCS7D01G308200.1	Wheat	cytosol	26.52	21.29
TraesCS2D01G600800.1	Wheat	cytosol	24.03	20.23

Protein Annotations

MapMan:12.4.2.4	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Arp7_plant	GO:GO:0000003
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006325	GO:GO:0007275
GO:GO:0008150	GO:GO:0009653	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009838
GO:GO:0009908	GO:GO:0009987	GO:GO:0010227	GO:GO:0016043	GO:GO:0032502	PFAM:PF00022
PRINTS:PR00190	PANTHER:PTHR11937	PANTHER:PTHR11937:SF257	SMART:SM00268	SUPFAM:SSF53067	EnsemblPlantsGene:TraesCS5D01G429200
EnsemblPlants:TraesCS5D01G429200.1	TIGR:cd00012	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:+:486444440..486450576

Molecular Weight (calculated)

39685.4 Da

IEP (calculated)

4.423

GRAVY (calculated)

-0.078

Length

362 amino acids

Sequence
(BLAST)

001: MEAVVVDAGS KLLKAGIALP DQAPGLVMPS KMKTEVEESE VADGAAAVVE EVVQPVVRGF VKDWDAMEDL LTYVLYRNIG WEMGDEGQIL FTQPLFTPKA
101: LREQLVQLMF EKFNVSGFYD SEQAVLSLYA VGRISGCTVD IGHGKIDIAP VCEGAVQHVA SKRFEIGGTD LTNLFAQELK KSNPSVNIDI SDVERLKEQY
201: ACCTEDQSAF EAIASTCQPE THTLPDGQVI TIEKERYIVG EALFQPSILG LEDYGIVHQL ITSVSNVASE YQKQLLENTM LCGGTVSMTG FEDRFQREAN
301: LSASAIRPTL VKAPEYMPED LARHSAWLGG AILAKVVFPQ NQHVTKGDYD ETGPSIVHKK CF

Best Arabidopsis Sequence Match ( AT3G60830.1 )
(BLAST)

001: MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF

Arabidopsis Description

ARP7Actin-related protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4Y5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.