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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, endoplasmic reticulum, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007566.1-P Field mustard cytosol 80.15 98.48
CDX71774 Canola cytosol 85.61 96.64
CDY56730 Canola cytosol 84.12 94.17
CDX67843 Canola cytosol 83.62 93.61
AT3G60830.1 Thale cress cytosol 84.12 93.39
CDY62715 Canola cytosol 81.14 90.08
VIT_13s0064g00730.t01 Wine grape cytosol 73.45 81.99
KRH13968 Soybean cytosol, nucleus 69.73 77.84
KRH32953 Soybean cytosol 69.73 77.84
KRH23861 Soybean cytosol, nucleus 69.73 77.84
Solyc11g008500.1.1 Tomato cytosol, nucleus 69.48 77.78
PGSC0003DMT400019210 Potato cytosol 69.48 77.78
KRH39934 Soybean cytosol 63.28 77.27
GSMUA_AchrUn_... Banana endoplasmic reticulum 53.85 74.57
Os03t0783000-01 Rice cytosol, nucleus 64.52 72.22
EER91551 Sorghum cytosol 64.52 72.22
TraesCS5D01G429200.1 Wheat cytosol 64.27 71.55
TraesCS5A01G420600.1 Wheat cytosol, nucleus 64.02 71.27
TraesCS5B01G422700.1 Wheat cytosol 64.02 71.27
VIT_00s0214g00170.t01 Wine grape cytosol 30.77 70.86
Zm00001d014112_P003 Maize cytosol 64.02 62.47
HORVU5Hr1G102220.2 Barley plastid 65.76 60.5
CDY65255 Canola cytosol 33.0 40.18
CDX93360 Canola cytosol 32.75 39.88
CDX73527 Canola cytosol 34.74 39.66
CDX85794 Canola cytosol 34.49 39.38
CDY40061 Canola cytosol 34.49 39.38
CDY31972 Canola cytosol 34.24 39.09
CDY30296 Canola cytosol 34.24 39.09
CDX99315 Canola cytosol 31.02 38.7
CDY48688 Canola cytosol 32.51 38.53
CDY07779 Canola cytosol 33.5 38.35
CDY01102 Canola cytosol 35.48 37.93
CDX82985 Canola cytosol 35.24 37.67
CDX78202 Canola cytosol 35.24 37.67
CDX88698 Canola cytosol 35.24 37.67
CDY21777 Canola cytosol 35.24 37.67
CDY30846 Canola cytosol 35.24 37.67
CDX86081 Canola cytosol 35.24 37.67
CDY38066 Canola cytosol 35.24 37.67
CDY53444 Canola cytosol 35.24 37.67
CDX76191 Canola cytosol 35.24 37.67
CDY08455 Canola cytosol 35.24 37.67
CDX71119 Canola cytosol 35.24 37.67
CDX99111 Canola cytosol 35.24 37.67
CDY21607 Canola cytosol 34.99 37.4
CDX69885 Canola cytosol 34.99 37.4
CDX81140 Canola cytosol 34.74 37.14
CDY56544 Canola cytosol 34.74 37.14
CDX74944 Canola cytosol 34.49 36.87
CDX87810 Canola cytosol 34.49 36.87
CDX91373 Canola cytosol 34.49 36.87
CDY18545 Canola cytosol 33.99 36.34
CDY61982 Canola cytosol 33.99 36.34
CDX95498 Canola cytosol 33.99 36.34
CDX92272 Canola cytosol 33.99 36.34
CDX79746 Canola cytosol 33.5 36.29
CDX82326 Canola cytosol 33.75 36.07
CDX94448 Canola cytosol 33.99 35.4
CDX92271 Canola cytosol 26.8 34.07
CDY14813 Canola cytosol 29.03 33.33
CDY06885 Canola cytosol 26.3 32.02
CDY71336 Canola cytosol 21.84 32.0
CDX67573 Canola cytosol 21.09 27.96
CDY20066 Canola cytosol 24.32 25.19
CDY00172 Canola cytosol 24.32 25.19
CDY52404 Canola cytosol 24.57 25.06
CDY13674 Canola cytosol 24.57 25.06
CDY34585 Canola cytosol 25.31 23.89
CDY21087 Canola cytosol 25.31 23.89
CDX83847 Canola cytosol 25.56 23.46
CDX98005 Canola cytosol 24.81 23.42
CDY26159 Canola cytosol 25.31 23.08
CDY19213 Canola cytosol 25.31 23.08
CDY19392 Canola cytosol 24.32 22.95
CDX96721 Canola cytosol 24.81 22.83
CDY33033 Canola nucleus 29.28 21.81
CDX80274 Canola nucleus 28.78 21.13
CDY42404 Canola cytosol 22.08 20.84
Protein Annotations
MapMan:12.4.2.4Gene3D:3.30.420.40Gene3D:3.90.640.10GO:A0A078ISB1UniProt:A0A078ISB1InterPro:Actin
InterPro:Arp7_plantEnsemblPlants:CDY52344ProteinID:CDY52344ProteinID:CDY52344.1GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006325GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016043GO:GO:0032502EnsemblPlantsGene:GSBRNA2T00006775001PFAM:PF00022PRINTS:PR00190
PANTHER:PTHR11937PANTHER:PTHR11937:SF257SMART:SM00268SUPFAM:SSF53067TMHMM:TMhelixUniParc:UPI0004EF47EA
SEG:seg:::::
Description
BnaA09g38930DBnaA09g38930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISB1]
Coordinates
chrLK033079:-:63064..65049
Molecular Weight (calculated)
44320.7 Da
IEP (calculated)
4.462
GRAVY (calculated)
-0.103
Length
403 amino acids
Sequence
(BLAST)
001: MADDKRKNTR NDVVFIFDTL FSVSQSSVSS SQSLFFASFY LVLLAMEALV VDAGSKLLKA GAAVPDQSPA MIIPSQMKRM VDDDGPSTVS EDVTLDPIER
101: GFIRDWDAME DLLRYVVYTG LGWEEGSEGN ILFTDPLSTP KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT LDIGHGKIDI APVLEGAVQH
201: IASKRFELGG TELTKLLAQE LGKSNPSMSL SMSDVEKLKE QYANCAEDEI AYEKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ
301: LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFETRFQKEA SLCSSAIRPT LVKPPEYMQE DVGLYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR
401: KCF
Best Arabidopsis Sequence Match ( AT3G60830.1 )
(BLAST)
001: MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF
Arabidopsis Description
ARP7Actin-related protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4Y5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.