Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
26228564
|
msms PMID:
26228564
doi
Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G429200.1 | Wheat | cytosol | 98.89 | 98.89 |
| TraesCS5B01G422700.1 | Wheat | cytosol | 98.62 | 98.62 |
| Os03t0783000-01 | Rice | cytosol, nucleus | 89.5 | 90.0 |
| EER91551 | Sorghum | cytosol | 89.5 | 90.0 |
| HORVU5Hr1G102220.2 | Barley | plastid | 97.51 | 80.59 |
| Zm00001d014112_P003 | Maize | cytosol | 88.67 | 77.72 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 60.5 | 75.26 |
| VIT_13s0064g00730.t01 | Wine grape | cytosol | 74.59 | 74.79 |
| CDY56730 | Canola | cytosol | 72.93 | 73.33 |
| Bra003429.1-P | Field mustard | cytosol | 72.38 | 72.78 |
| CDX67843 | Canola | cytosol | 72.1 | 72.5 |
| CDY62715 | Canola | cytosol | 72.38 | 72.18 |
| KRH32953 | Soybean | cytosol | 71.82 | 72.02 |
| AT3G60830.1 | Thale cress | cytosol | 72.1 | 71.9 |
| PGSC0003DMT400019210 | Potato | cytosol | 70.99 | 71.39 |
| Solyc11g008500.1.1 | Tomato | cytosol, nucleus | 70.99 | 71.39 |
| CDX71774 | Canola | cytosol | 70.17 | 71.15 |
| KRH13968 | Soybean | cytosol, nucleus | 70.17 | 70.36 |
| KRH23861 | Soybean | cytosol, nucleus | 69.61 | 69.81 |
| KRH39934 | Soybean | cytosol | 62.71 | 68.79 |
| VIT_00s0214g00170.t01 | Wine grape | cytosol | 32.04 | 66.29 |
| CDY52344 | Canola | cytosol | 71.27 | 64.02 |
| Bra007566.1-P | Field mustard | cytosol | 53.87 | 59.45 |
| TraesCS4A01G356100.2 | Wheat | cytosol | 35.36 | 33.77 |
| TraesCS5A01G000400.1 | Wheat | golgi | 35.08 | 33.69 |
| TraesCS3A01G377300.1 | Wheat | cytosol | 34.25 | 32.98 |
| TraesCS1A01G274400.1 | Wheat | golgi | 33.15 | 31.91 |
| TraesCS1A01G020500.2 | Wheat | cytosol | 35.08 | 31.2 |
| TraesCS5A01G124300.2 | Wheat | golgi | 35.08 | 31.05 |
| TraesCS4A01G264400.3 | Wheat | cytosol, plastid | 31.49 | 29.08 |
| TraesCS1A01G179000.1 | Wheat | cytosol | 31.77 | 25.56 |
| TraesCS3A01G369400.1 | Wheat | cytosol | 27.35 | 24.75 |
| TraesCS7A01G311700.1 | Wheat | cytosol | 26.52 | 22.02 |
| TraesCS5A01G356000.1 | Wheat | cytosol, nucleus | 26.8 | 21.9 |
| TraesCS6A01G211000.1 | Wheat | cytosol | 25.69 | 21.78 |
| TraesCS6A01G162300.2 | Wheat | cytosol | 26.24 | 21.44 |
| TraesCS2A01G585700.1 | Wheat | cytosol | 24.31 | 20.47 |
Protein Annotations
| MapMan:12.4.2.4 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | InterPro:Actin | InterPro:Arp7_plant | GO:GO:0000003 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006325 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009838 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010227 | GO:GO:0016043 | GO:GO:0032502 | PFAM:PF00022 |
| PRINTS:PR00190 | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF257 | SMART:SM00268 | SUPFAM:SSF53067 | EnsemblPlantsGene:TraesCS5A01G420600 |
| EnsemblPlants:TraesCS5A01G420600.1 | TIGR:cd00012 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5A:+:606960831..606966482
Molecular Weight (calculated)
39734.5 Da
IEP (calculated)
4.435
GRAVY (calculated)
-0.070
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAVVVDAGS KLLKAGIALP DQAPGLVMPS KMKTEVEENE VADGAAAVVE EVVHPVVRGF VKDWDAMEDL LTYVLYRNIG WEMGDEGQIL FTEPLFTPKA
101: LREQLVQLMF EKFNVSGFYD SEQAVLSLYA VGRISGCTVD IGHGKIDIAP VCEGAVQHVA SKRFEIGGID LTNLFAQELK KSNPSVNIDI SDVERLKEQY
201: ACCTEDQSAF EAIASTCQPE THTLPDGQVI TIEKERYIVG EALFQPSILG LEDYGIVHQL ITSVSNVASE YQKQLLENTM LCGGTVSMTG FEDRFQREAN
301: LSASAIRPTL VKAPEYMPED LARHSAWLGG AILAKVVFPQ NQHVTKGDYD ETGPSIVHKK CF
101: LREQLVQLMF EKFNVSGFYD SEQAVLSLYA VGRISGCTVD IGHGKIDIAP VCEGAVQHVA SKRFEIGGID LTNLFAQELK KSNPSVNIDI SDVERLKEQY
201: ACCTEDQSAF EAIASTCQPE THTLPDGQVI TIEKERYIVG EALFQPSILG LEDYGIVHQL ITSVSNVASE YQKQLLENTM LCGGTVSMTG FEDRFQREAN
301: LSASAIRPTL VKAPEYMPED LARHSAWLGG AILAKVVFPQ NQHVTKGDYD ETGPSIVHKK CF
001: MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF
Arabidopsis Description
ARP7Actin-related protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4Y5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.