Factsheet for TraesCS1A01G179000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G177400.1	Wheat	cytosol	79.33	94.69
HORVU1Hr1G047440.2	Barley	cytosol	79.33	94.69
TraesCS1B01G201400.1	Wheat	cytosol	79.33	94.69
EER93954	Sorghum	cytosol	79.11	94.43
Zm00001d013873_P001	Maize	plasma membrane, plastid	79.11	94.43
Zm00001d032480_P002	Maize	plasma membrane, plastid	78.89	94.16
Os10t0510000-01	Rice	plastid	78.44	93.63
TraesCS4A01G356100.2	Wheat	cytosol	78.22	92.88
GSMUA_Achr1P05990_001	Banana	plasma membrane	76.89	91.78
TraesCS5A01G000400.1	Wheat	golgi	76.0	90.72
CDX87810	Canola	cytosol	75.78	90.45
GSMUA_Achr1P20200_001	Banana	cytosol	69.56	90.2
TraesCS4A01G264400.3	Wheat	cytosol, plastid	78.22	89.8
TraesCS1A01G274400.1	Wheat	golgi	74.89	89.63
TraesCS3A01G377300.1	Wheat	cytosol	73.78	88.3
TraesCS5A01G124300.2	Wheat	golgi	78.0	85.82
TraesCS1A01G020500.2	Wheat	cytosol	77.56	85.75
TraesCS3A01G369400.1	Wheat	cytosol	35.11	39.5
TraesCS5A01G356000.1	Wheat	cytosol, nucleus	33.11	33.63
TraesCS6A01G162300.2	Wheat	cytosol	32.22	32.73
TraesCS6A01G211000.1	Wheat	cytosol	30.22	31.85
TraesCS5A01G420600.1	Wheat	cytosol, nucleus	25.56	31.77
TraesCS7A01G311700.1	Wheat	cytosol	29.78	30.73
TraesCS2A01G585700.1	Wheat	cytosol	25.56	26.74

Protein Annotations

EnsemblPlants:TraesCS1A01G179000.1	EnsemblPlantsGene:TraesCS1A01G179000	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Actin/actin-like_CS
InterPro:Actin_CS	PANTHER:PTHR11937	PANTHER:PTHR11937:SF252	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406
ScanProsite:PS01132	SMART:SM00268	SUPFAM:SSF53067	TIGR:cd00012	MapMan:20.2.1	:

Description

No Description!

Coordinates

chr1A:-:323642183..323643771

Molecular Weight (calculated)

49916.2 Da

IEP (calculated)

5.459

GRAVY (calculated)

-0.023

Length

450 amino acids

Sequence
(BLAST)

001: MADAEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFS VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: SFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSIIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQVTAN FAPMVVVLDS FYHLKVSDMS ISCADVDLQG RVRRIWPSHR
401: PQEVLLDSCR QTYSQCIPLS SSIIRWWFCW TNVGPMALVY GCIYSIMCVV

Best Arabidopsis Sequence Match ( AT2G37620.2 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.