Factsheet for HORVU1Hr1G047440.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G177400.1	Wheat	cytosol	100.0	100.0
TraesCS1B01G201400.1	Wheat	cytosol	100.0	100.0
EER93954	Sorghum	cytosol	99.73	99.73
Zm00001d013873_P001	Maize	plasma membrane, plastid	99.73	99.73
Zm00001d032480_P002	Maize	plasma membrane, plastid	99.47	99.47
Os10t0510000-01	Rice	plastid	98.94	98.94
HORVU5Hr1G117900.1	Barley	cytosol	97.61	97.61
GSMUA_Achr1P05990_001	Banana	plasma membrane	96.82	96.82
GSMUA_Achr1P20200_001	Banana	cytosol	88.06	95.68
CDX87810	Canola	cytosol	95.49	95.49
HORVU1Hr1G074350.1	Barley	cytosol	93.63	93.88
HORVU1Hr1G002840.6	Barley	plasma membrane	97.08	89.93
HORVU4Hr1G008310.9	Barley	cytosol	94.96	87.96
HORVU5Hr1G000180.1	Barley	cytosol, nucleus	94.96	87.53
HORVU3Hr1G083380.1	Barley	cytosol	88.06	85.13
TraesCS1A01G179000.1	Wheat	cytosol	94.69	79.33
HORVU5Hr1G039850.3	Barley	mitochondrion	93.63	75.91
HORVU4Hr1G007240.3	Barley	cytosol	43.77	35.18
HORVU6Hr1G032610.8	Barley	cytosol	41.64	32.64
HORVU6Hr1G053910.4	Barley	cytosol	37.67	32.13
HORVU5Hr1G088030.1	Barley	plastid	42.18	31.3
HORVU7Hr1G074460.5	Barley	cytosol	36.07	31.19
HORVU0Hr1G005770.1	Barley	cytosol	33.16	29.07
HORVU5Hr1G102220.2	Barley	plastid	33.16	28.54

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	EMBL:AK354695	InterPro:Actin	InterPro:Actin/actin-like_CS
InterPro:Actin_CS	UniProt:F2CSU3	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
EnsemblPlantsGene:HORVU1Hr1G047440	EnsemblPlants:HORVU1Hr1G047440.2	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432
ScanProsite:PS01132	PANTHER:PTHR11937	PANTHER:PTHR11937:SF252	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI0002004DF8

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CSU3]

Coordinates

chrchr1H:-:350897447..350900417

Molecular Weight (calculated)

41664.1 Da

IEP (calculated)

5.166

GRAVY (calculated)

-0.152

Length

377 amino acids

Sequence
(BLAST)

001: MADAEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFS VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: SFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSIIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS RAEYEESGPA IVHRKCF

Best Arabidopsis Sequence Match ( AT5G09810.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: MFTTTAEREI VRDIKEKLAY VALDYEQELE TAKSSSSVEK NYELPDGQVI TIGAERFRCP EVLFQPSLIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KSEYDESGPS IVHRKCF

Arabidopsis Description

ACT7AtACT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UEW4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.