Factsheet for HORVU5Hr1G102220.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G429200.1	Wheat	cytosol	81.05	98.07
TraesCS5B01G422700.1	Wheat	cytosol	80.82	97.79
TraesCS5A01G420600.1	Wheat	cytosol, nucleus	80.59	97.51
Os03t0783000-01	Rice	cytosol, nucleus	74.2	90.28
EER91551	Sorghum	cytosol	74.2	90.28
Zm00001d014112_P003	Maize	cytosol	72.83	77.24
VIT_13s0064g00730.t01	Wine grape	cytosol	62.1	75.35
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	50.0	75.26
CDY56730	Canola	cytosol	60.05	73.06
Bra003429.1-P	Field mustard	cytosol	59.59	72.5
CDX67843	Canola	cytosol	59.36	72.22
CDY62715	Canola	cytosol	59.59	71.9
KRH32953	Soybean	cytosol	59.13	71.75
Solyc11g008500.1.1	Tomato	cytosol, nucleus	58.9	71.67
AT3G60830.1	Thale cress	cytosol	59.36	71.63
PGSC0003DMT400019210	Potato	cytosol	58.68	71.39
CDX71774	Canola	cytosol	57.76	70.87
KRH13968	Soybean	cytosol, nucleus	58.22	70.64
KRH23861	Soybean	cytosol, nucleus	57.53	69.81
KRH39934	Soybean	cytosol	51.6	68.48
VIT_00s0214g00170.t01	Wine grape	cytosol	26.48	66.29
CDY52344	Canola	cytosol	60.5	65.76
Bra007566.1-P	Field mustard	cytosol	46.12	61.59
HORVU5Hr1G117900.1	Barley	cytosol	29.45	34.22
HORVU1Hr1G047440.2	Barley	cytosol	28.54	33.16
HORVU1Hr1G074350.1	Barley	cytosol	27.63	32.18
HORVU5Hr1G000180.1	Barley	cytosol, nucleus	29.45	31.54
HORVU1Hr1G002840.6	Barley	plasma membrane	29.22	31.45
HORVU4Hr1G008310.9	Barley	cytosol	29.22	31.45
HORVU3Hr1G083380.1	Barley	cytosol	27.85	31.28
HORVU5Hr1G039850.3	Barley	mitochondrion	29.22	27.53
HORVU7Hr1G074460.5	Barley	cytosol	21.23	21.33
HORVU4Hr1G007240.3	Barley	cytosol	22.6	21.11
HORVU6Hr1G032610.8	Barley	cytosol	23.06	21.0
HORVU0Hr1G005770.1	Barley	cytosol	20.55	20.93
HORVU6Hr1G053910.4	Barley	cytosol	20.55	20.36
HORVU5Hr1G088030.1	Barley	plastid	22.83	19.68

Protein Annotations

MapMan:12.4.2.4	Gene3D:3.30.420.40	Gene3D:3.90.640.10	UniProt:A0A287SI94	InterPro:Actin	InterPro:Arp7_plant
GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006325
GO:GO:0007275	GO:GO:0008150	GO:GO:0009653	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0009838	GO:GO:0009908	GO:GO:0009987	GO:GO:0010227	GO:GO:0016043	GO:GO:0032502
EnsemblPlantsGene:HORVU5Hr1G102220	EnsemblPlants:HORVU5Hr1G102220.2	PFAM:PF00022	PRINTS:PR00190	PANTHER:PTHR11937	PANTHER:PTHR11937:SF257
SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000B4883D7	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:613984455..613990297

Molecular Weight (calculated)

47624.4 Da

IEP (calculated)

4.731

GRAVY (calculated)

-0.208

Length

438 amino acids

Sequence
(BLAST)

001: LDARHASHPL RPAAAARSSL RCRETRASSS AKSSNTSPSL SREAENFQKS SETLAPRVAA AAESELPRLY PPPAMEAVVV DAGSKLLKAG IALPDQAPGL
101: VMPSKMKTEA EESEQADGAA AAAVVEEGVQ PVVRGFVKDW DAMEDLLSYV LYRNIGWEMG DEGQILFTEP LFTPKALREQ LVQLMFEKFN VSGFYDSEQA
201: VLSLYAVGRI SGCTVDIGHG KIDIAPVCEG AVQHVASKRF EIGGTDLTNL FAQELKKSNP SVNIDISDVE RLKEQYACCT EDQLAFEAIA STCQPETHTL
301: PDGQVITIEK ERYIVGEALF QPSILGLEDY GIVHQLITSV SNVASEYQKQ LLENTMLCGG TASMTGFEDR FQREANLSAS AIRPTLVKAP EYMPEDLARH
401: SAWLGGAILA KVVFPQNQHV TKGDYDETGP SIVHKKCF

Best Arabidopsis Sequence Match ( AT3G60830.1 )
(BLAST)

001: MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF

Arabidopsis Description

ARP7Actin-related protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4Y5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.