Factsheet for GSMUA_AchrUn_randomP22580_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
cytosol 2
extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0064g00730.t01	Wine grape	cytosol	76.29	61.5
CDY56730	Canola	cytosol	75.6	61.11
EER91551	Sorghum	cytosol	75.6	61.11
AT3G60830.1	Thale cress	cytosol	75.6	60.61
Bra003429.1-P	Field mustard	cytosol	74.91	60.56
CDX67843	Canola	cytosol	74.91	60.56
Os03t0783000-01	Rice	cytosol, nucleus	74.91	60.56
CDX71774	Canola	cytosol	74.23	60.5
TraesCS5A01G420600.1	Wheat	cytosol, nucleus	75.26	60.5
TraesCS5D01G429200.1	Wheat	cytosol	74.91	60.22
CDY62715	Canola	cytosol	74.57	59.78
TraesCS5B01G422700.1	Wheat	cytosol	74.23	59.67
KRH32953	Soybean	cytosol	73.88	59.56
KRH13968	Soybean	cytosol, nucleus	73.54	59.28
Solyc11g008500.1.1	Tomato	cytosol, nucleus	72.16	58.33
PGSC0003DMT400019210	Potato	cytosol	72.16	58.33
KRH23861	Soybean	cytosol, nucleus	70.79	57.06
KRH39934	Soybean	cytosol	63.23	55.76
CDY52344	Canola	cytosol	74.57	53.85
Zm00001d014112_P003	Maize	cytosol	73.88	52.06
HORVU5Hr1G102220.2	Barley	plastid	75.26	50.0
Bra007566.1-P	Field mustard	cytosol	55.33	49.09
GSMUA_Achr6P34320_001	Banana	cytosol	32.3	38.52
VIT_00s0214g00170.t01	Wine grape	cytosol	22.34	37.14
GSMUA_Achr1P20200_001	Banana	cytosol	35.4	29.68
GSMUA_Achr3P20240_001	Banana	cytosol	29.9	29.0
GSMUA_Achr2P16160_001	Banana	cytosol	37.11	28.65
GSMUA_Achr7P10410_001	Banana	cytosol	37.11	28.65
GSMUA_Achr10P...	Banana	cytosol	36.77	28.38
GSMUA_Achr9P03170_001	Banana	cytosol	36.43	28.19
GSMUA_Achr6P25350_001	Banana	cytosol	36.43	28.12
GSMUA_Achr1P05990_001	Banana	plasma membrane	36.43	28.12
GSMUA_Achr10P...	Banana	cytosol	26.46	28.0
GSMUA_Achr8P02660_001	Banana	cytosol	36.08	27.85
GSMUA_AchrUn_...	Banana	plasma membrane	36.08	27.85
GSMUA_Achr11P...	Banana	cytosol	36.08	27.85
GSMUA_Achr8P16150_001	Banana	cytosol	35.74	27.59
GSMUA_Achr3P02960_001	Banana	cytosol	35.74	27.59
GSMUA_Achr4P31250_001	Banana	cytosol	35.74	27.59
GSMUA_Achr10P...	Banana	cytosol	30.93	27.36
GSMUA_Achr5P29190_001	Banana	cytosol	31.96	26.72
GSMUA_Achr9P08850_001	Banana	cytosol	31.96	26.65
GSMUA_Achr10P...	Banana	cytosol	24.05	26.62
GSMUA_Achr11P...	Banana	cytosol	31.27	26.07
GSMUA_Achr2P15150_001	Banana	cytosol	30.93	25.79
GSMUA_Achr6P02480_001	Banana	cytosol	26.12	25.59
GSMUA_Achr7P18630_001	Banana	cytosol	27.84	25.31
GSMUA_Achr2P08030_001	Banana	cytosol	29.55	24.57
GSMUA_AchrUn_...	Banana	cytosol	27.49	20.57
GSMUA_Achr8P01270_001	Banana	cytosol	26.12	17.8
GSMUA_Achr6P21120_001	Banana	cytosol	25.77	17.56
GSMUA_Achr8P16860_001	Banana	endoplasmic reticulum	28.52	17.55
GSMUA_Achr2P05960_001	Banana	cytosol	17.87	16.99
GSMUA_Achr9P07630_001	Banana	cytosol	23.37	15.89
GSMUA_AchrUn_...	Banana	cytosol	22.34	14.94
GSMUA_Achr2P05970_001	Banana	cytosol	6.19	10.17

Protein Annotations

MapMan:12.4.2.4	Gene3D:3.30.420.40	Gene3D:3.30.420.520	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Arp7_plant
GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006325
GO:GO:0007275	GO:GO:0008150	GO:GO:0009653	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0009838	GO:GO:0009908	GO:GO:0009987	GO:GO:0010227	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	GO:GO:0032502	EnsemblPlantsGene:GSMUA_AchrUn_randomG22580_001	EnsemblPlants:GSMUA_AchrUn_randomP22580_001	EnsemblPlants:GSMUA_AchrUn_randomT22580_001	UniProt:M0UBG6
PFAM:PF00022	PRINTS:PR00190	PANTHER:PTHR11937	PANTHER:PTHR11937:SF257	SMART:SM00268	SUPFAM:SSF53067
TMHMM:TMhelix	UniParc:UPI000294E914	:	:	:	:

Description

Actin-related protein 7 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG22580_001]

Coordinates

chrchrUn_random:-:110981693..110984788

Molecular Weight (calculated)

32301.8 Da

IEP (calculated)

5.192

GRAVY (calculated)

-0.093

Length

291 amino acids

Sequence
(BLAST)

001: MWLTKYSGWL FGFTTFVAHV PIGITILQAI REQLVQLMFE TFNVSGFYAS EQAVLSLYAV GRISGCTVDI GHGKIDIAPV CEGAVQHIAS KRFQIGGIDL
101: TNLLTQELRK SNPLMNIDIS EVEKLKEQYA RCAEDQVAFE ETQRTWPKET HTLPDGQTIT IGREGYIVGE ALFQPSILGL EEYGIVEQLV RSISSVSSEN
201: LRQLLENTML CGGTASMSGF EERFQKEANL CSSSIRPSLI KPPEYMPENL SKNSAWMGGA ILAKVVFPQN QHVTKGDYDE TGPAIVHKKC F

Best Arabidopsis Sequence Match ( AT3G60830.1 )
(BLAST)

001: MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF

Arabidopsis Description

ARP7Actin-related protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4Y5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.