Factsheet for Bra007566.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
golgi 2
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	golgi
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52344	Canola	cytosol	98.48	80.15
CDX71774	Canola	cytosol	81.71	75.07
Bra003429.1-P	Field mustard	cytosol	80.49	73.33
AT3G60830.1	Thale cress	cytosol	80.79	73.0
VIT_13s0064g00730.t01	Wine grape	cytosol	69.21	62.88
PGSC0003DMT400019210	Potato	cytosol	65.55	59.72
KRH32953	Soybean	cytosol	65.55	59.56
Solyc11g008500.1.1	Tomato	cytosol, nucleus	65.24	59.44
KRH13968	Soybean	cytosol, nucleus	65.24	59.28
KRH23861	Soybean	cytosol, nucleus	65.24	59.28
KRH39934	Soybean	cytosol	58.23	57.88
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	49.09	55.33
Os03t0783000-01	Rice	cytosol, nucleus	60.37	55.0
EER91551	Sorghum	cytosol	60.06	54.72
TraesCS5D01G429200.1	Wheat	cytosol	59.76	54.14
TraesCS5B01G422700.1	Wheat	cytosol	59.45	53.87
TraesCS5A01G420600.1	Wheat	cytosol, nucleus	59.45	53.87
Zm00001d014112_P003	Maize	cytosol	59.45	47.22
HORVU5Hr1G102220.2	Barley	plastid	61.59	46.12
VIT_00s0214g00170.t01	Wine grape	cytosol	19.51	36.57
Bra009081.1-P	Field mustard	cytosol	31.71	29.46
Bra034778.1-P	Field mustard	cytosol	33.23	28.91
Bra020319.1-P	Field mustard	cytosol	29.88	28.82
Bra033819.1-P	Field mustard	cytosol	32.62	28.38
Bra019486.1-P	Field mustard	cytosol	32.62	28.38
Bra018210.1-P	Field mustard	cytosol	32.62	28.38
Bra028615.1-P	Field mustard	cytosol	32.32	28.12
Bra007025.1-P	Field mustard	cytosol	32.32	28.12
Bra014865.1-P	Field mustard	cytosol	32.32	28.12
Bra006719.1-P	Field mustard	cytosol	28.35	28.01
Bra005178.1-P	Field mustard	cytosol	30.18	27.97
Bra022356.1-P	Field mustard	cytosol	27.44	27.86
Bra000010.1-P	Field mustard	cytosol	32.01	27.85
Bra006033.1-P	Field mustard	cytosol	32.01	27.85
Bra017166.1-P	Field mustard	cytosol	31.4	27.32
Bra016895.1-P	Field mustard	cytosol	22.56	24.42
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	24.39	22.66
Bra030818.1-P	Field mustard	cytosol	14.63	21.62
Bra025243.1-P	Field mustard	cytosol	20.43	18.31
Bra003156.1-P	Field mustard	cytosol	11.28	17.96
Bra016738.1-P	Field mustard	cytosol	23.17	17.8
Bra039097.1-P	Field mustard	cytosol	21.04	17.74
Bra002571.1-P	Field mustard	nucleus	32.32	17.52
Bra019815.1-P	Field mustard	cytosol	22.56	17.33
Bra019816.1-P	Field mustard	nucleus	6.1	5.31

Protein Annotations

MapMan:12.4.2.4	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Arp7_plant	EnsemblPlantsGene:Bra007566
EnsemblPlants:Bra007566.1	EnsemblPlants:Bra007566.1-P	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006325	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0032502	UniProt:M4CTM2	PFAM:PF00022	PANTHER:PTHR11937	PANTHER:PTHR11937:SF257	SMART:SM00268
SUPFAM:SSF53067	TMHMM:TMhelix	UniParc:UPI00025428D5	SEG:seg	:	:

Description

AT3G60830 (E=3e-114) ATARP7, ARP7 | ATARP7 (ACTIN-RELATED PROTEIN 7); structural constituent of cytoskeleton

Coordinates

chrA09:+:29813592..29815342

Molecular Weight (calculated)

36165.0 Da

IEP (calculated)

4.534

GRAVY (calculated)

-0.188

Length

328 amino acids

Sequence
(BLAST)

001: MADDKRKNTR NDVVLIFDTL FSVSQSSVSS SQSLFFASFY LVLLAMEALV VDAGSKLLKA GAAVPDQSPA MIIPSQMKRM VDDDGPSTVS EDVTLDPIER
101: GFIRDWDAME DLLRYCPVLE GAVQHIASKR FELGGTELTK LLAQELGKSN PSTNLSMSDV EKLKEQYANC ADDEIAYEKT QNCEIEQHTL PDGQVISIGR
201: ERYSVGEALF QPSILGLEEH GIVEQLVRII STVSSENHRQ LLENTVLCGG TTSMTGFETR FQKEASLCSS AIRPTLVKPP EYMQEDVGLY SAWVGGAILA
301: KVVFPQNQHV TKADYDETGP SVVHRKCF

Best Arabidopsis Sequence Match ( AT3G60830.1 )
(BLAST)

001: MEALVVDAGS KFLKAGAAIP DQSPAMIIPS QMKRMVDDGS SSADNPTTVF EDVTLDPIER GLIRDWDAME DLLRYVVYTG LGWEEGNEGN ILFTDPLCTP
101: KAIREQLVQL MFETFNVSGF YASEQAVLSL YAVGRISGCT VDIGHGKIDI APVLEGAVQH IASKRFELGG TELTKLFAQE LGKTNPSMNL SMSDVEKLKE
201: QYANCAEDEI AYKKTQNCEI EQHTLPDGQV ISIGRERYSV GEALFQPSIL GLEEHGIVEQ LVRIISTVSS ENHRQLLENT VLCGGTTSMT GFESRFQKEA
301: NLCSSAIRPT LVKPPEYMPE NLGMYSAWVG GAILAKVVFP QNQHVTKADY DETGPSVVHR KCF

Arabidopsis Description

ARP7Actin-related protein 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8L4Y5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.