Factsheet for Bra002571.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018210.1-P	Field mustard	cytosol	62.15	99.73
Bra006719.1-P	Field mustard	cytosol	54.71	99.7
Bra019486.1-P	Field mustard	cytosol	61.98	99.47
Bra033819.1-P	Field mustard	cytosol	61.82	99.2
Bra020319.1-P	Field mustard	cytosol	55.7	99.12
AT5G59370.2	Thale cress	cytosol	61.65	98.94
VIT_13s0019g01240.t01	Wine grape	cytosol	60.33	96.82
KRH38098	Soybean	cytosol	60.33	96.82
KRH10268	Soybean	mitochondrion, nucleus	60.33	96.82
KRH71847	Soybean	endoplasmic reticulum, nucleus	60.17	96.55
Bra007025.1-P	Field mustard	cytosol	60.17	96.55
Bra000010.1-P	Field mustard	cytosol	60.0	96.29
KRH23061	Soybean	endoplasmic reticulum, mitochondrion, nucleus	60.0	96.29
Bra014865.1-P	Field mustard	cytosol	60.0	96.29
Bra017166.1-P	Field mustard	cytosol	59.83	96.02
KRH01660	Soybean	mitochondrion, nucleus	59.83	96.02
KRG95386	Soybean	cytosol	59.83	96.02
KRH29804	Soybean	endoplasmic reticulum, mitochondrion, nucleus	59.83	96.02
KRH67068	Soybean	endoplasmic reticulum, mitochondrion, nucleus	59.83	96.02
KRH70465	Soybean	mitochondrion, nucleus	59.83	96.02
Bra005178.1-P	Field mustard	cytosol	56.03	95.76
Bra034778.1-P	Field mustard	cytosol	59.67	95.76
KRH56507	Soybean	endoplasmic reticulum, mitochondrion	59.67	95.76
VIT_08s0007g06520.t01	Wine grape	cytosol	59.67	95.76
VIT_06s0004g04570.t01	Wine grape	cytosol	59.5	95.74
GSMUA_AchrUn_...	Banana	plasma membrane	59.5	95.49
KRG93168	Soybean	mitochondrion, nucleus	59.5	95.49
GSMUA_Achr10P...	Banana	cytosol	41.49	95.44
Bra028615.1-P	Field mustard	cytosol	58.68	94.16
Solyc10g086460.1.1	Tomato	unclear	58.51	93.9
Bra009081.1-P	Field mustard	cytosol	54.71	93.77
PGSC0003DMT400049429	Potato	cytosol	58.35	93.63
Bra006033.1-P	Field mustard	cytosol	58.35	93.63
PGSC0003DMT400023026	Potato	cytosol	58.02	93.1
GSMUA_Achr7P18630_001	Banana	cytosol	48.43	91.56
Bra003156.1-P	Field mustard	cytosol	30.74	90.29
Bra022356.1-P	Field mustard	cytosol	47.93	89.78
Solyc09g010750.1.1	Tomato	cytosol	25.12	84.92
KRH24799	Soybean	cytosol	57.19	84.39
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	48.26	82.72
Bra016895.1-P	Field mustard	cytosol	37.69	75.25
CDY33033	Canola	nucleus	51.74	57.86
CDX80274	Canola	nucleus	50.91	56.1
Bra039097.1-P	Field mustard	cytosol	27.44	42.67
Bra025243.1-P	Field mustard	cytosol	25.79	42.62
Bra003429.1-P	Field mustard	cytosol	22.98	38.61
Bra016738.1-P	Field mustard	cytosol	23.8	33.72
Bra019815.1-P	Field mustard	cytosol	23.47	33.26
Bra007566.1-P	Field mustard	cytosol	17.52	32.32
Bra030818.1-P	Field mustard	cytosol	9.75	26.58
Bra019816.1-P	Field mustard	nucleus	7.27	11.67

Protein Annotations

MapMan:12.5.4.2	MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.30.890.10	Gene3D:3.90.640.10	InterPro:Actin
InterPro:Actin/actin-like_CS	InterPro:Actin_CS	EnsemblPlantsGene:Bra002571	EnsemblPlants:Bra002571.1	EnsemblPlants:Bra002571.1-P	InterPro:DNA-bd_dom_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR001739	UniProt:M4CEE0
InterPro:Methyl_CpG_DNA-bd	PFAM:PF00022	PFAM:PF01429	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432
ScanProsite:PS01132	PFscan:PS50982	PANTHER:PTHR11937	PANTHER:PTHR11937:SF276	SMART:SM00268	SUPFAM:SSF53067
SUPFAM:SSF54171	UniParc:UPI0002543B19	SEG:seg	:	:	:

Description

AT3G46520 (E=1e-217) ACT12 | ACT12 (ACTIN-12); structural constituent of cytoskeleton

Coordinates

chrA10:+:8818352..8821938

Molecular Weight (calculated)

67306.9 Da

IEP (calculated)

8.692

GRAVY (calculated)

-0.602

Length

605 amino acids

Sequence
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTTAEREI VRDMKEKLSY IALDYEQELE TSNTSSSVEK SFELPDGQVI TIGAERFRCP EVLFQPSMIG MENPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFGG IGDRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKLKPGN RKKQTTILKH HKDPSSKSLP
401: TKSANLIGDE QQESLIQGRK RRSNWLRGES VRIGMSNGTE QTRKRAAPGD SNWLPSGWRV EDKVRTSGAT AGSVDKYYYE PITGRKFRSK TEVLYYLEHG
501: TSKKGSKKPD NTDSSSDHVE GQGSNKSSRK AKEPTPPPRP RSPPLKFDFE NPPEKVSWSA ANAGEEGWAP FVGDDKVQDS LRREWCTAFN VVTTKNPTKL
601: SSLRR

Best Arabidopsis Sequence Match ( AT3G46520.2 )
(BLAST)

Arabidopsis Description

ACT12Actin-12 [Source:UniProtKB/Swiss-Prot;Acc:P53497]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.