Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71847 | Soybean | endoplasmic reticulum, nucleus | 99.73 | 99.73 |
| KRG95386 | Soybean | cytosol | 98.67 | 98.67 |
| KRH67068 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 98.67 | 98.67 |
| KRH29804 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 98.41 | 98.41 |
| KRH10268 | Soybean | mitochondrion, nucleus | 98.14 | 98.14 |
| KRH23061 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 98.14 | 98.14 |
| VIT_08s0007g06520.t01 | Wine grape | cytosol | 97.61 | 97.61 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 97.61 | 97.61 |
| PGSC0003DMT400060953 | Potato | cytosol | 97.61 | 97.61 |
| Solyc10g080500.1.1 | Tomato | extracellular, nucleus, plastid, unclear | 97.61 | 97.61 |
| AT3G46520.2 | Thale cress | cytosol | 97.35 | 97.35 |
| GSMUA_Achr10P... | Banana | cytosol | 67.9 | 97.34 |
| CDY38066 | Canola | cytosol | 97.08 | 97.08 |
| AT2G37620.1 | Thale cress | cytosol | 97.08 | 97.08 |
| CDY21777 | Canola | cytosol | 97.08 | 97.08 |
| CDX99111 | Canola | cytosol | 97.08 | 97.08 |
| CDX88698 | Canola | cytosol | 97.08 | 97.08 |
| CDX86081 | Canola | cytosol | 97.08 | 97.08 |
| CDX78202 | Canola | cytosol | 97.08 | 97.08 |
| CDX71119 | Canola | cytosol | 97.08 | 97.08 |
| AT3G53750.2 | Thale cress | cytosol | 97.08 | 97.08 |
| AT5G59370.2 | Thale cress | cytosol | 97.08 | 97.08 |
| Bra007025.1-P | Field mustard | cytosol | 97.08 | 97.08 |
| Bra018210.1-P | Field mustard | cytosol | 97.08 | 97.08 |
| Bra019486.1-P | Field mustard | cytosol | 97.08 | 97.08 |
| CDX73527 | Canola | cytosol | 90.72 | 96.88 |
| AT3G12110.1 | Thale cress | cytosol | 96.82 | 96.82 |
| Bra033819.1-P | Field mustard | cytosol | 96.82 | 96.82 |
| CDX76191 | Canola | cytosol | 96.82 | 96.82 |
| Bra000010.1-P | Field mustard | cytosol | 96.82 | 96.82 |
| KRH70465 | Soybean | mitochondrion, nucleus | 96.82 | 96.82 |
| CDX82985 | Canola | cytosol | 96.82 | 96.82 |
| KRH01660 | Soybean | mitochondrion, nucleus | 96.82 | 96.82 |
| Bra014865.1-P | Field mustard | cytosol | 96.82 | 96.82 |
| Bra006719.1-P | Field mustard | cytosol | 85.15 | 96.69 |
| Bra034778.1-P | Field mustard | cytosol | 96.55 | 96.55 |
| CDY01102 | Canola | cytosol | 96.55 | 96.55 |
| CDX74944 | Canola | cytosol | 96.55 | 96.55 |
| Bra017166.1-P | Field mustard | cytosol | 96.55 | 96.55 |
| CDX91373 | Canola | cytosol | 96.55 | 96.55 |
| CDY53444 | Canola | cytosol | 96.55 | 96.55 |
| CDX93360 | Canola | cytosol | 84.62 | 96.37 |
| CDY65255 | Canola | cytosol | 84.62 | 96.37 |
| CDY07779 | Canola | cytosol | 89.92 | 96.31 |
| KRH43389 | Soybean | cytosol | 96.29 | 96.29 |
| CDY08455 | Canola | cytosol | 96.29 | 96.29 |
| KRH56507 | Soybean | endoplasmic reticulum, mitochondrion | 96.29 | 96.29 |
| KRH59535 | Soybean | cytosol | 96.29 | 96.29 |
| CDY30846 | Canola | cytosol | 96.29 | 96.29 |
| Bra020319.1-P | Field mustard | cytosol | 86.74 | 96.18 |
| CDY48688 | Canola | cytosol | 86.74 | 96.18 |
| KRH64098 | Soybean | cytosol | 96.02 | 96.02 |
| KRG93168 | Soybean | mitochondrion, nucleus | 96.02 | 96.02 |
| KRH53856 | Soybean | endoplasmic reticulum, mitochondrion | 84.35 | 95.78 |
| Bra005178.1-P | Field mustard | cytosol | 89.92 | 95.76 |
| KRH10484 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 93.63 | 93.63 |
| KRH43946 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 93.63 | 93.63 |
| GSMUA_Achr7P18630_001 | Banana | cytosol | 79.05 | 93.12 |
| CDX94448 | Canola | cytosol | 93.9 | 91.47 |
| CDX79746 | Canola | cytosol | 89.92 | 91.13 |
| Bra003156.1-P | Field mustard | cytosol | 49.07 | 89.81 |
| KRH24799 | Soybean | cytosol | 94.16 | 86.59 |
| CDY71336 | Canola | cytosol | 55.44 | 76.0 |
| CDX67573 | Canola | cytosol | 55.97 | 69.41 |
| Bra002571.1-P | Field mustard | nucleus | 96.82 | 60.33 |
| CDY33033 | Canola | nucleus | 79.05 | 55.08 |
| CDX80274 | Canola | nucleus | 77.72 | 53.37 |
| KRG94584 | Soybean | cytosol | 44.56 | 43.19 |
| KRH06905 | Soybean | cytosol | 43.77 | 42.42 |
| KRH39934 | Soybean | cytosol | 33.16 | 37.88 |
| KRH13968 | Soybean | cytosol, nucleus | 36.07 | 37.67 |
| KRH23861 | Soybean | cytosol, nucleus | 35.81 | 37.4 |
| KRH32953 | Soybean | cytosol | 35.54 | 37.12 |
| KRH66446 | Soybean | nucleus | 43.24 | 36.63 |
| KRH48882 | Soybean | nucleus | 42.71 | 36.1 |
| KRH41617 | Soybean | nucleus | 40.85 | 35.73 |
| KRH59222 | Soybean | cytosol | 17.77 | 34.9 |
| KRH59228 | Soybean | nucleus | 38.2 | 33.64 |
| KRH61849 | Soybean | cytosol, nucleus | 33.69 | 29.13 |
Protein Annotations
| EntrezGene:100777705 | MapMan:20.2.1 | Gene3D:3.30.420.40 | Gene3D:3.90.640.10 | EMBL:ACUP02005614 | InterPro:Actin |
| InterPro:Actin/actin-like_CS | InterPro:Actin_CS | EnsemblPlantsGene:GLYMA_09G111200 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005524 | UniProt:K7LD67 | EnsemblPlants:KRH38098 | ProteinID:KRH38098 | ProteinID:KRH38098.1 | ProteinID:KRH38099.1 |
| ProteinID:KRH38100.1 | ProteinID:KRH38101.1 | PFAM:PF00022 | PRINTS:PR00190 | ScanProsite:PS00406 | ScanProsite:PS00432 |
| ScanProsite:PS01132 | PANTHER:PTHR11937 | PANTHER:PTHR11937:SF355 | SMART:SM00268 | SUPFAM:SSF53067 | UniParc:UPI00023382F8 |
Description
hypothetical protein
Coordinates
chr9:+:22030926..22034410
Molecular Weight (calculated)
41680.1 Da
IEP (calculated)
5.162
GRAVY (calculated)
-0.184
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDVKEKLAY IALDYEQELE TAKTSSAVEK SYELPDGQVI TIGAERFRCP EVLFQPSMIG MESPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDVKEKLAY IALDYEQELE TAKTSSAVEK SYELPDGQVI TIGAERFRCP EVLFQPSMIG MESPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.