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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY65255 Canola cytosol 92.92 99.09
CDX93360 Canola cytosol 92.07 98.19
CDY30296 Canola cytosol 95.18 95.18
CDY31972 Canola cytosol 95.18 95.18
CDY40061 Canola cytosol 95.18 95.18
CDX85794 Canola cytosol 95.18 95.18
Bra007025.1-P Field mustard cytosol 100.0 93.63
CDX78202 Canola cytosol 100.0 93.63
CDX76191 Canola cytosol 99.72 93.37
AT3G53750.2 Thale cress cytosol 99.43 93.1
CDY30846 Canola cytosol 99.15 92.84
CDX74944 Canola cytosol 98.3 92.04
CDX91373 Canola cytosol 98.3 92.04
CDY07779 Canola cytosol 91.22 91.48
GSMUA_AchrUn_... Banana plasma membrane 97.45 91.25
CDY48688 Canola cytosol 87.82 91.18
CDX82985 Canola cytosol 96.88 90.72
KRH38098 Soybean cytosol 96.88 90.72
CDX86081 Canola cytosol 96.6 90.45
CDY21777 Canola cytosol 96.6 90.45
CDX88698 Canola cytosol 96.6 90.45
KRH71847 Soybean endoplasmic reticulum, nucleus 96.6 90.45
CDY53444 Canola cytosol 96.6 90.45
CDX71119 Canola cytosol 96.6 90.45
CDX99111 Canola cytosol 96.6 90.45
CDY38066 Canola cytosol 96.32 90.19
VIT_06s0004g04570.t01 Wine grape cytosol 96.03 90.16
KRH10268 Soybean mitochondrion, nucleus 96.03 89.92
VIT_13s0019g01240.t01 Wine grape cytosol 95.75 89.66
KRH70465 Soybean mitochondrion, nucleus 95.75 89.66
KRH67068 Soybean endoplasmic reticulum, mitochondrion, nucleus 95.75 89.66
KRH56507 Soybean endoplasmic reticulum, mitochondrion 95.75 89.66
KRG95386 Soybean cytosol 95.75 89.66
KRH01660 Soybean mitochondrion, nucleus 95.75 89.66
KRG93168 Soybean mitochondrion, nucleus 95.47 89.39
VIT_08s0007g06520.t01 Wine grape cytosol 95.47 89.39
KRH23061 Soybean endoplasmic reticulum, mitochondrion, nucleus 95.47 89.39
KRH29804 Soybean endoplasmic reticulum, mitochondrion, nucleus 95.47 89.39
CDY01102 Canola cytosol 95.47 89.39
CDY08455 Canola cytosol 95.18 89.12
CDX69885 Canola cytosol 95.18 89.12
CDY21607 Canola cytosol 95.18 89.12
CDX81140 Canola cytosol 94.62 88.59
CDY56544 Canola cytosol 94.62 88.59
GSMUA_Achr10P... Banana cytosol 65.44 87.83
PGSC0003DMT400023026 Potato cytosol 93.77 87.8
CDX94448 Canola cytosol 95.75 87.34
PGSC0003DMT400049429 Potato cytosol 92.92 87.0
Solyc10g086460.1.1 Tomato unclear 92.92 87.0
Solyc09g010750.1.1 Tomato cytosol 43.91 86.59
CDX79746 Canola cytosol 91.22 86.56
CDX87810 Canola cytosol 91.78 85.94
GSMUA_Achr7P18630_001 Banana cytosol 77.34 85.31
CDX92272 Canola cytosol 89.8 84.08
CDY61982 Canola cytosol 89.8 84.08
CDX95498 Canola cytosol 89.8 84.08
CDY18545 Canola cytosol 89.8 84.08
CDX82326 Canola cytosol 89.52 83.82
CDX99315 Canola cytosol 76.2 83.28
CDX92271 Canola cytosol 73.65 82.02
CDY71336 Canola cytosol 61.47 78.91
KRH24799 Soybean cytosol 90.93 78.29
CDY14813 Canola cytosol 70.82 71.23
CDY06885 Canola cytosol 66.57 71.0
CDX67573 Canola cytosol 57.79 67.11
CDY33033 Canola nucleus 79.04 51.57
CDX80274 Canola nucleus 77.62 49.91
CDY20066 Canola cytosol 46.46 42.16
CDY00172 Canola cytosol 46.46 42.16
CDY13674 Canola cytosol 46.74 41.77
CDY52404 Canola cytosol 46.74 41.77
CDY56730 Canola cytosol 39.09 38.33
CDX67843 Canola cytosol 39.09 38.33
CDX71774 Canola cytosol 38.24 37.82
CDY62715 Canola cytosol 38.81 37.74
CDX83847 Canola cytosol 43.91 35.31
CDX96721 Canola cytosol 43.63 35.16
CDY26159 Canola cytosol 43.91 35.07
CDY19213 Canola cytosol 43.91 35.07
CDY52344 Canola cytosol 39.66 34.74
CDY21087 Canola cytosol 38.24 31.62
CDY34585 Canola cytosol 37.96 31.38
CDX98005 Canola cytosol 37.68 31.15
CDY19392 Canola cytosol 37.39 30.91
CDY42404 Canola cytosol 33.43 27.63
Protein Annotations
EnsemblPlants:CDX73527EnsemblPlantsGene:GSBRNA2T00109051001Gene3D:3.30.420.40Gene3D:3.90.640.10GO:A0A078C9M3InterPro:Actin
InterPro:Actin/actin-like_CSInterPro:Actin_CSPANTHER:PTHR11937PANTHER:PTHR11937:SF276PFAM:PF00022PRINTS:PR00190
ProteinID:CDX73527ProteinID:CDX73527.1ScanProsite:PS00432ScanProsite:PS01132SMART:SM00268SUPFAM:SSF53067
UniParc:UPI0004EF272CMapMan:20.2.1::::
Description
BnaC08g24760D
Coordinates
chrLK031799:-:983565..985814
Molecular Weight (calculated)
39265.1 Da
IEP (calculated)
4.929
GRAVY (calculated)
-0.191
Length
353 amino acids
Sequence
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMYPIE HGIVNNWDDM EKIWHHTFYN ELRVAPEEHP ILLTEAPLNP KANREKMTQI
101: MFETFNAPAM YVAIQAVLSL YASGRTTGIV LDSGDGVSHT VPIYEGYALP HAILRLDLAG RDLTDALMKI LTERGYSFTT TAEREIVRDI KEKLCYIALD
201: YEQELETANT SSSVEKNYEL PDGQVITIGS ERFRCPEVLY QPSMIGMENP GIHETTYNSI MKCDVDIRKD LYGNIVLSGG TTMFPGIADR MSKEITALAP
301: SSMKIKVVAP PERKYSVWIG GSILASLSTF QQMWIAKAEY DESGPSIVHR KCF
Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.