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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra019486.1-P Field mustard cytosol 99.73 99.73
AT3G46520.2 Thale cress cytosol 99.73 99.73
CDY21777 Canola cytosol 99.73 99.73
CDX71119 Canola cytosol 99.47 99.47
CDX99111 Canola cytosol 99.47 99.47
CDX88698 Canola cytosol 99.47 99.47
CDX86081 Canola cytosol 99.47 99.47
CDX82985 Canola cytosol 99.2 99.2
CDY53444 Canola cytosol 98.94 98.94
CDY48688 Canola cytosol 89.12 98.82
KRH38098 Soybean cytosol 97.08 97.08
KRH10268 Soybean mitochondrion, nucleus 97.08 97.08
VIT_13s0019g01240.t01 Wine grape cytosol 96.82 96.82
KRH71847 Soybean endoplasmic reticulum, nucleus 96.82 96.82
KRH23061 Soybean endoplasmic reticulum, mitochondrion, nucleus 96.55 96.55
CDX74944 Canola cytosol 96.55 96.55
CDX78202 Canola cytosol 96.55 96.55
CDX91373 Canola cytosol 96.55 96.55
CDX73527 Canola cytosol 90.19 96.32
KRH29804 Soybean endoplasmic reticulum, mitochondrion, nucleus 96.29 96.29
KRH01660 Soybean mitochondrion, nucleus 96.29 96.29
KRG95386 Soybean cytosol 96.29 96.29
KRH70465 Soybean mitochondrion, nucleus 96.29 96.29
KRH67068 Soybean endoplasmic reticulum, mitochondrion, nucleus 96.29 96.29
CDX76191 Canola cytosol 96.29 96.29
CDY07779 Canola cytosol 89.66 96.02
VIT_08s0007g06520.t01 Wine grape cytosol 96.02 96.02
KRH56507 Soybean endoplasmic reticulum, mitochondrion 96.02 96.02
VIT_06s0004g04570.t01 Wine grape cytosol 95.76 96.01
GSMUA_Achr10P... Banana cytosol 66.84 95.82
CDX93360 Canola cytosol 84.08 95.77
CDY65255 Canola cytosol 84.08 95.77
CDY30846 Canola cytosol 95.76 95.76
KRG93168 Soybean mitochondrion, nucleus 95.76 95.76
GSMUA_AchrUn_... Banana plasma membrane 95.76 95.76
CDY01102 Canola cytosol 95.49 95.49
CDY08455 Canola cytosol 95.23 95.23
CDY21607 Canola cytosol 94.69 94.69
CDX69885 Canola cytosol 94.69 94.69
Solyc10g086460.1.1 Tomato unclear 94.43 94.43
CDY40061 Canola cytosol 88.33 94.33
CDY31972 Canola cytosol 88.33 94.33
CDX85794 Canola cytosol 88.33 94.33
CDY30296 Canola cytosol 88.33 94.33
PGSC0003DMT400049429 Potato cytosol 94.16 94.16
CDY56544 Canola cytosol 94.16 94.16
CDX81140 Canola cytosol 94.16 94.16
PGSC0003DMT400023026 Potato cytosol 93.1 93.1
GSMUA_Achr7P18630_001 Banana cytosol 77.98 91.88
CDX87810 Canola cytosol 91.78 91.78
CDX94448 Canola cytosol 93.63 91.21
CDX79746 Canola cytosol 89.66 90.86
CDX99315 Canola cytosol 77.72 90.71
CDX95498 Canola cytosol 90.45 90.45
CDX92272 Canola cytosol 90.45 90.45
CDY61982 Canola cytosol 90.45 90.45
CDY18545 Canola cytosol 90.45 90.45
CDX82326 Canola cytosol 90.19 90.19
CDX92271 Canola cytosol 75.33 89.59
KRH24799 Soybean cytosol 92.04 84.63
Solyc09g010750.1.1 Tomato cytosol 40.05 84.36
CDY71336 Canola cytosol 55.17 75.64
CDY14813 Canola cytosol 65.78 70.66
CDY06885 Canola cytosol 61.27 69.79
CDX67573 Canola cytosol 55.7 69.08
CDY33033 Canola nucleus 81.43 56.75
CDX80274 Canola nucleus 80.11 55.01
CDY00172 Canola cytosol 43.77 42.42
CDY20066 Canola cytosol 43.77 42.42
CDY52404 Canola cytosol 44.03 42.03
CDY13674 Canola cytosol 44.03 42.03
CDY62715 Canola cytosol 37.67 39.12
CDY56730 Canola cytosol 37.14 38.89
CDX67843 Canola cytosol 37.14 38.89
CDX71774 Canola cytosol 36.34 38.38
CDX83847 Canola cytosol 42.44 36.45
CDY26159 Canola cytosol 42.71 36.43
CDY19213 Canola cytosol 42.71 36.43
CDX96721 Canola cytosol 42.18 36.3
CDY52344 Canola cytosol 37.67 35.24
CDY21087 Canola cytosol 38.2 33.72
CDY34585 Canola cytosol 37.93 33.49
CDX98005 Canola cytosol 37.67 33.26
CDY19392 Canola cytosol 37.4 33.02
CDY42404 Canola cytosol 30.77 27.17
Protein Annotations
MapMan:20.2.1Gene3D:3.30.420.40Gene3D:3.90.640.10GO:A0A078HKC3UniProt:A0A078HKC3InterPro:Actin
InterPro:Actin/actin-like_CSInterPro:Actin_CSEnsemblPlants:CDY38066ProteinID:CDY38066ProteinID:CDY38066.1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005524EnsemblPlantsGene:GSBRNA2T00065321001PFAM:PF00022PRINTS:PR00190
ScanProsite:PS00406ScanProsite:PS00432ScanProsite:PS01132PANTHER:PTHR11937PANTHER:PTHR11937:SF366SMART:SM00268
SUPFAM:SSF53067UniParc:UPI0004EE16EB::::
Description
BnaC03g75050DBnaC03g75050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HKC3]
Coordinates
chrLK032415:+:133999..135817
Molecular Weight (calculated)
41782.2 Da
IEP (calculated)
5.157
GRAVY (calculated)
-0.200
Length
377 amino acids
Sequence
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDH LMKILTERGY
201: SFTTTAEREI VRDMKEKLSY IALDYEQELE TSITSSSVEK SFELPDGQVI TIGAERFRCP EVLFQPSMIG MENPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFGG IGDRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Best Arabidopsis Sequence Match ( AT3G46520.2 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDH LMKILTERGY
201: SFTTTAEREI VRDMKEKLSY IALDYEQELE TSKTSSSVEK SFELPDGQVI TIGAERFRCP EVLFQPSMIG MENPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFGG IGDRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT12Actin-12 [Source:UniProtKB/Swiss-Prot;Acc:P53497]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.