Factsheet for Bra019486.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21777	Canola	cytosol	100.0	100.0
AT3G46520.2	Thale cress	cytosol	99.73	99.73
CDY38066	Canola	cytosol	99.73	99.73
Bra018210.1-P	Field mustard	cytosol	99.73	99.73
Bra006719.1-P	Field mustard	cytosol	87.8	99.7
Bra033819.1-P	Field mustard	cytosol	99.2	99.2
Bra020319.1-P	Field mustard	cytosol	89.39	99.12
KRH38098	Soybean	cytosol	97.08	97.08
KRH10268	Soybean	mitochondrion, nucleus	97.08	97.08
VIT_13s0019g01240.t01	Wine grape	cytosol	96.82	96.82
KRH71847	Soybean	endoplasmic reticulum, nucleus	96.82	96.82
Bra007025.1-P	Field mustard	cytosol	96.82	96.82
Bra000010.1-P	Field mustard	cytosol	96.55	96.55
KRH23061	Soybean	endoplasmic reticulum, mitochondrion, nucleus	96.55	96.55
Bra014865.1-P	Field mustard	cytosol	96.55	96.55
Bra017166.1-P	Field mustard	cytosol	96.29	96.29
KRH67068	Soybean	endoplasmic reticulum, mitochondrion, nucleus	96.29	96.29
KRH70465	Soybean	mitochondrion, nucleus	96.29	96.29
KRH29804	Soybean	endoplasmic reticulum, mitochondrion, nucleus	96.29	96.29
KRH01660	Soybean	mitochondrion, nucleus	96.29	96.29
KRG95386	Soybean	cytosol	96.29	96.29
Bra005178.1-P	Field mustard	cytosol	90.19	96.05
KRH56507	Soybean	endoplasmic reticulum, mitochondrion	96.02	96.02
VIT_08s0007g06520.t01	Wine grape	cytosol	96.02	96.02
VIT_06s0004g04570.t01	Wine grape	cytosol	95.76	96.01
GSMUA_Achr10P...	Banana	cytosol	66.84	95.82
Bra034778.1-P	Field mustard	cytosol	95.76	95.76
KRG93168	Soybean	mitochondrion, nucleus	95.76	95.76
GSMUA_AchrUn_...	Banana	plasma membrane	95.76	95.76
Bra028615.1-P	Field mustard	cytosol	94.43	94.43
Solyc10g086460.1.1	Tomato	unclear	94.43	94.43
PGSC0003DMT400049429	Potato	cytosol	94.16	94.16
Bra009081.1-P	Field mustard	cytosol	88.06	94.05
Bra006033.1-P	Field mustard	cytosol	93.9	93.9
PGSC0003DMT400023026	Potato	cytosol	93.1	93.1
GSMUA_Achr7P18630_001	Banana	cytosol	77.98	91.88
Bra022356.1-P	Field mustard	cytosol	77.19	90.09
Bra003156.1-P	Field mustard	cytosol	48.81	89.32
KRH24799	Soybean	cytosol	92.04	84.63
Solyc09g010750.1.1	Tomato	cytosol	40.05	84.36
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	77.19	82.44
Bra016895.1-P	Field mustard	cytosol	60.48	75.25
Bra002571.1-P	Field mustard	nucleus	99.47	61.98
Bra039097.1-P	Field mustard	cytosol	43.77	42.42
Bra025243.1-P	Field mustard	cytosol	41.11	42.35
Bra003429.1-P	Field mustard	cytosol	37.14	38.89
Bra016738.1-P	Field mustard	cytosol	38.2	33.72
Bra019815.1-P	Field mustard	cytosol	37.67	33.26
Bra007566.1-P	Field mustard	cytosol	28.38	32.62
Bra030818.1-P	Field mustard	cytosol	15.92	27.03
Bra019816.1-P	Field mustard	nucleus	11.67	11.67

Protein Annotations

MapMan:20.2.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	InterPro:Actin	InterPro:Actin/actin-like_CS	InterPro:Actin_CS
EnsemblPlantsGene:Bra019486	EnsemblPlants:Bra019486.1	EnsemblPlants:Bra019486.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005524	UniProt:M4DSJ3	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00406	ScanProsite:PS00432
ScanProsite:PS01132	PANTHER:PTHR11937	PANTHER:PTHR11937:SF366	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000253F0ED

Description

AT3G46520 (E=3e-220) ACT12 | ACT12 (ACTIN-12); structural constituent of cytoskeleton

Coordinates

chrA06:-:12984366..12985976

Molecular Weight (calculated)

41783.1 Da

IEP (calculated)

5.157

GRAVY (calculated)

-0.221

Length

377 amino acids

Sequence
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDH LMKILTERGY
201: SFTTTAEREI VRDMKEKLSY IALDYEQELE TSNTSSSVEK SFELPDGQVI TIGAERFRCP EVLFQPSMIG MENPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFGG IGDRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Best Arabidopsis Sequence Match ( AT3G46520.2 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDH LMKILTERGY
201: SFTTTAEREI VRDMKEKLSY IALDYEQELE TSKTSSSVEK SFELPDGQVI TIGAERFRCP EVLFQPSMIG MENPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFGG IGDRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT12Actin-12 [Source:UniProtKB/Swiss-Prot;Acc:P53497]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.