Factsheet for Bra009081.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000010.1-P
Bra005178.1-P
Bra006033.1-P
Bra009081.1-P
Bra017166.1-P
Bra018268.1-P
Bra022278.1-P
Bra028615.1-P
Bra034778.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G09810.1	Bra018268.1-P	AT2G31200.1	21798944
AT5G09810.1	Bra000010.1-P	AT2G37620.1	21798944
AT5G09810.1	Bra005178.1-P	AT2G37620.1	21798944
AT5G09810.1	Bra017166.1-P	AT2G37620.1	21798944
AT5G09810.1	Bra034778.1-P	AT3G12110.1	21798944
AT5G09810.1	Bra022278.1-P	AT3G18060.1	21798944
AT5G09810.1	Bra006033.1-P	AT5G09810.1	21798944
AT5G09810.1	Bra009081.1-P	AT5G09810.1	21798944
AT5G09810.1	Bra028615.1-P	AT5G09810.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P34320_001	Banana	cytosol	66.86	96.72
CDX69885	Canola	cytosol	99.72	93.37
CDY21607	Canola	cytosol	99.72	93.37
AT5G09810.1	Thale cress	cytosol	99.15	92.84
Bra028615.1-P	Field mustard	cytosol	98.87	92.57
Bra006033.1-P	Field mustard	cytosol	98.3	92.04
HORVU5Hr1G117900.1	Barley	cytosol	98.3	92.04
TraesCS5B01G516100.1	Wheat	cytosol	98.3	92.04
TraesCS5D01G516200.1	Wheat	cytosol	98.3	92.04
KRH64098	Soybean	cytosol	98.02	91.78
Os11t0163100-01	Rice	nucleus, plasma membrane, plastid	98.02	91.78
PGSC0003DMT400047481	Potato	cytosol	98.02	91.78
Solyc03g078400.2.1	Tomato	nucleus, plastid	98.02	91.78
TraesCS4A01G356100.2	Wheat	cytosol	98.3	91.56
EES08028	Sorghum	cytosol	97.45	91.25
KRH43389	Soybean	cytosol	97.45	91.25
KRH59535	Soybean	cytosol	97.45	91.25
KXG23031	Sorghum	cytosol	97.45	91.25
PGSC0003DMT400010174	Potato	cytosol	97.45	91.25
Solyc11g005330.1.1	Tomato	nucleus	97.45	91.25
TraesCS5B01G124100.1	Wheat	cytosol	97.45	91.25
GSMUA_Achr6P25350_001	Banana	cytosol	97.17	90.98
Zm00001d053177_P004	Maize	cytosol	97.17	90.98
KRH53856	Soybean	endoplasmic reticulum, mitochondrion	85.55	90.96
GSMUA_Achr9P03170_001	Banana	cytosol	96.88	90.96
Os03t0836000-01	Rice	plasma membrane, plastid	96.88	90.72
Os05t0106600-01	Rice	nucleus	96.88	90.72
GSMUA_Achr3P02960_001	Banana	cytosol	96.6	90.45
GSMUA_Achr8P16150_001	Banana	cytosol	96.6	90.45
KXG21029	Sorghum	cytosol	96.6	90.45
TraesCS1B01G024500.1	Wheat	golgi, nucleus	96.6	90.45
TraesCS1D01G020000.1	Wheat	cytosol	96.6	90.45
Zm00001d011086_P005	Maize	cytosol	96.6	90.45
Zm00001d035720_P002	Maize	cytosol	96.6	90.45
GSMUA_Achr9P08850_001	Banana	cytosol	89.24	90.26
GSMUA_Achr5P29190_001	Banana	cytosol	88.95	90.23
EER90564	Sorghum	cytosol	96.32	90.19
GSMUA_Achr2P16160_001	Banana	cytosol	96.32	90.19
GSMUA_Achr10P...	Banana	cytosol	96.03	89.92
GSMUA_Achr7P10410_001	Banana	cytosol	95.75	89.66
GSMUA_Achr8P02660_001	Banana	cytosol	95.75	89.66
Os01t0964133-01	Rice	plasma membrane	95.75	89.66
GSMUA_Achr11P...	Banana	cytosol	88.1	89.11
Bra007025.1-P	Field mustard	cytosol	94.9	88.86
Bra000010.1-P	Field mustard	cytosol	94.62	88.59
Bra014865.1-P	Field mustard	cytosol	94.62	88.59
Bra034778.1-P	Field mustard	cytosol	94.62	88.59
Zm00001d035722_P007	Maize	plasma membrane	96.6	88.57
Bra020319.1-P	Field mustard	cytosol	85.27	88.53
Bra017166.1-P	Field mustard	cytosol	94.33	88.33
GSMUA_Achr11P...	Banana	cytosol	94.33	88.33
Bra018210.1-P	Field mustard	cytosol	94.05	88.06
Bra019486.1-P	Field mustard	cytosol	94.05	88.06
Bra033819.1-P	Field mustard	cytosol	94.05	88.06
Zm00001d012277_P001	Maize	cytosol	93.2	87.5
TraesCS5D01G132200.1	Wheat	golgi	91.78	87.33
EES01810	Sorghum	cytosol	92.92	87.23
Bra005178.1-P	Field mustard	cytosol	87.25	87.01
Os05t0438800-01	Rice	plasma membrane, plastid	92.63	86.97
Zm00001d034761_P002	Maize	cytosol	96.32	86.73
HORVU1Hr1G074350.1	Barley	cytosol	92.35	86.7
TraesCS1A01G274400.1	Wheat	golgi	92.35	86.7
TraesCS1B01G283900.1	Wheat	cytosol	92.35	86.7
TraesCS1D01G274400.1	Wheat	cytosol	92.35	86.7
Zm00001d042731_P002	Maize	extracellular, plasma membrane, plastid	92.35	86.7
Bra006719.1-P	Field mustard	cytosol	81.3	86.45
EES19603	Sorghum	cytosol	91.78	86.17
Zm00001d010159_P002	Maize	extracellular, plasma membrane	91.5	85.9
Zm00001d008746_P001	Maize	cytosol	66.01	84.73
Bra022356.1-P	Field mustard	cytosol	77.05	84.21
TraesCS5A01G124300.2	Wheat	golgi	97.45	84.11
HORVU1Hr1G002840.6	Barley	plasma membrane	96.6	83.78
TraesCS1A01G020500.2	Wheat	cytosol	96.6	83.78
Bra003156.1-P	Field mustard	cytosol	47.31	81.07
Zm00001d016508_P001	Maize	cytosol	30.88	78.99
GSMUA_Achr2P08030_001	Banana	cytosol	78.19	78.86
KXG21030	Sorghum	cytosol	86.69	78.66
GSMUA_Achr10P...	Banana	cytosol	60.91	78.18
Zm00001d019635_P001	Maize	cytosol	30.31	77.54
Zm00001d016605_P001	Maize	cytosol	34.56	77.22
Bra037560.1-P	Field mustard	cytoskeleton, cytosol	77.05	77.05
Zm00001d019396_P001	Maize	cytosol	36.26	76.19
Bra016895.1-P	Field mustard	cytosol	64.87	75.58
VIT_04s0044g00580.t01	Wine grape	extracellular	98.3	75.43
Zm00001d011087_P001	Maize	plastid	96.6	75.11
HORVU5Hr1G039850.3	Barley	mitochondrion	92.92	70.54
Zm00001d007792_P001	Maize	cytosol	52.69	70.45
Zm00001d003298_P001	Maize	cytosol	50.14	67.3
Zm00001d004087_P001	Maize	cytosol	36.83	60.19
Os01t0866100-01	Rice	plasma membrane	33.71	58.62
Zm00001d004855_P002	Maize	cytoskeleton, cytosol, nucleus	96.03	57.46
Bra002571.1-P	Field mustard	nucleus	93.77	54.71
Bra039097.1-P	Field mustard	cytosol	46.18	41.9
Bra025243.1-P	Field mustard	cytosol	43.34	41.8
Bra003429.1-P	Field mustard	cytosol	38.81	38.06
Bra016738.1-P	Field mustard	cytosol	38.81	32.08
Bra007566.1-P	Field mustard	cytosol	29.46	31.71
Bra019815.1-P	Field mustard	cytosol	38.24	31.62
Zm00001d034421_P004	Maize	plastid	41.64	31.41
Bra030818.1-P	Field mustard	cytosol	18.13	28.83
Bra019816.1-P	Field mustard	nucleus	10.76	10.08

Protein Annotations

EnsemblPlants:Bra009081.1	EnsemblPlants:Bra009081.1-P	EnsemblPlantsGene:Bra009081	Gene3D:3.30.420.40	Gene3D:3.90.640.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	InterPro:Actin	InterPro:Actin/actin-like_CS	InterPro:Actin_CS
PANTHER:PTHR11937	PANTHER:PTHR11937:SF252	PFAM:PF00022	PRINTS:PR00190	ScanProsite:PS00432	ScanProsite:PS01132
SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI00025448AA	UniProt:M4CXY4	MapMan:20.2.1	:

Description

AT5G09810 (E=5e-176) ACT2, ACT7 | ACT7 (ACTIN 7); structural constituent of cytoskeleton

Coordinates

chrA10:-:15163694..15165102

Molecular Weight (calculated)

39161.1 Da

IEP (calculated)

5.026

GRAVY (calculated)

-0.152

Length

353 amino acids

Sequence
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMYPIE HGIVSNWDDM EKIWHHTFYN ELRVAPEEHP VLLTEAPLNP KSNREKMTQI
101: MFETFNVPAM YVAIQAVLSL YASGRTTGIV LDSGDGVSHT VPIYEGYALP HAILRLDLAG RDLTDSLMKI LTERGYMFTT TAEREIVRDI KEKLAYVALD
201: FEQELETAKS SSSVEKNYEL PDGQVITIGA ERFRCPEVLF QPSLIGMEAP GIHETTYNSI MKCDVDIRKD LYGNIVLSGG STMFPGIADR MSKEITALAP
301: SSMKIKVVAP PERKYSVWIG GSILASLSTF QQMWISKGEY DESGPSIVHR KCF

Best Arabidopsis Sequence Match ( AT2G37620.1 )
(BLAST)

001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF

Arabidopsis Description

ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.