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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytoskeleton 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytoskeleton, cytosol, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003298_P001
Zm00001d004087_P001
Zm00001d004855_P002
Zm00001d007792_P001
Zm00001d008517_P001
Zm00001d008746_P001
Zm00001d008768_P001
Zm00001d009747_P001
Zm00001d010159_P002
Zm00001d011086_P005
Zm00001d011087_P001
Zm00001d011131_P001
Zm00001d011132_P001
Zm00001d011202_P002
Zm00001d012277_P001
Zm00001d013141_P001
Zm00001d014053_P001
Zm00001d016508_P001
Zm00001d016605_P001
Zm00001d019396_P001
Zm00001d019635_P001
Zm00001d029295_P001
Zm00001d029656_P003
Zm00001d034024_P001
Zm00001d034326_P001
Zm00001d034421_P004
Zm00001d034761_P002
Zm00001d035720_P002
Zm00001d035722_P007
Zm00001d038078_P001
Zm00001d038846_P001
Zm00001d039163_P002
Zm00001d040038_P001
Zm00001d042097_P001
Zm00001d042731_P002
Zm00001d044301_P001
Zm00001d047714_P001
Zm00001d053177_P004

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49240.1 Zm00001d009747_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011131_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011132_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011202_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d038846_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d039163_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d044301_P001 AT1G72770.1 19033529
AT5G09810.1 Zm00001d013141_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d029656_P003 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034024_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034326_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d008517_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d008768_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d014053_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d029295_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d038078_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d040038_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d042097_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d047714_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d003298_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004855_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d007792_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d008746_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d010159_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011086_P005 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d012277_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016508_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016605_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019396_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019635_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034421_P004 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034761_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035720_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035722_P007 AT5G09810.1 21798944
AT5G09810.1 Zm00001d042731_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d053177_P004 AT5G09810.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d053177_P004 Maize cytosol 63.05 98.67
EES08028 Sorghum cytosol 62.71 98.14
Os11t0163100-01 Rice nucleus, plasma membrane, plastid 62.37 97.61
TraesCS5B01G124100.1 Wheat cytosol 62.2 97.35
AT5G09810.1 Thale cress cytosol 61.86 96.82
Zm00001d032480_P002 Maize plasma membrane, plastid 61.86 96.82
Zm00001d013873_P001 Maize plasma membrane, plastid 61.69 96.55
CDX69885 Canola cytosol 61.69 96.55
CDY21607 Canola cytosol 61.69 96.55
Zm00001d011086_P005 Maize cytosol 61.69 96.55
Zm00001d035720_P002 Maize cytosol 61.69 96.55
CDY30296 Canola cytosol 57.63 96.32
CDY40061 Canola cytosol 57.63 96.32
CDY31972 Canola cytosol 57.63 96.32
CDX85794 Canola cytosol 57.63 96.32
Bra028615.1-P Field mustard cytosol 61.53 96.29
KRH64098 Soybean cytosol 61.53 96.29
KRH43389 Soybean cytosol 61.53 96.29
KRH59535 Soybean cytosol 61.53 96.29
KRH53856 Soybean endoplasmic reticulum, mitochondrion 54.07 96.08
Bra009081.1-P Field mustard cytosol 57.46 96.03
CDX81140 Canola cytosol 61.36 96.02
CDY56544 Canola cytosol 61.36 96.02
Zm00001d033790_P001 Maize cytosol 61.36 96.02
VIT_12s0178g00200.t01 Wine grape cytosol 61.36 96.02
Zm00001d013410_P001 Maize cytosol 61.36 96.02
PGSC0003DMT400047481 Potato cytosol 61.19 95.76
Solyc03g078400.2.1 Tomato nucleus, plastid 61.19 95.76
Bra006033.1-P Field mustard cytosol 61.19 95.76
PGSC0003DMT400076499 Potato cytosol 31.19 95.34
Solyc11g005330.1.1 Tomato nucleus 60.85 95.23
PGSC0003DMT400010174 Potato cytosol 60.85 95.23
Solyc01g104770.2.1 Tomato nucleus 60.85 95.23
Zm00001d019635_P001 Maize cytosol 22.2 94.93
Zm00001d035722_P007 Maize plasma membrane 61.69 94.55
TraesCS5D01G132200.1 Wheat golgi 59.15 94.07
Zm00001d012277_P001 Maize cytosol 59.83 93.88
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 59.66 93.37
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 59.66 93.37
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 59.32 93.09
Zm00001d034761_P002 Maize cytosol 61.69 92.86
Zm00001d016605_P001 Maize cytosol 24.75 92.41
Zm00001d010159_P002 Maize extracellular, plasma membrane 58.64 92.02
CDX99315 Canola cytosol 50.17 91.64
Bra022356.1-P Field mustard cytosol 50.0 91.33
Solyc04g071260.2.1 Tomato plastid 58.31 91.25
CDX82326 Canola cytosol 58.14 90.98
AT1G49240.1 Thale cress cytosol 58.14 90.98
AT3G18780.3 Thale cress cytosol 57.97 90.72
CDX92272 Canola cytosol 57.97 90.72
CDX95498 Canola cytosol 57.97 90.72
CDY18545 Canola cytosol 57.97 90.72
CDY61982 Canola cytosol 57.97 90.72
TraesCS5A01G124300.2 Wheat golgi 62.2 89.73
CDX92271 Canola cytosol 48.14 89.59
PGSC0003DMT400076501 Potato cytosol 29.32 86.5
Zm00001d016508_P001 Maize cytosol 20.17 86.23
Zm00001d008746_P001 Maize cytosol 39.32 84.36
Bra037560.1-P Field mustard cytoskeleton, cytosol 49.32 82.44
Zm00001d019396_P001 Maize cytosol 23.39 82.14
Zm00001d011087_P001 Maize plastid 61.69 80.18
Zm00001d007792_P001 Maize cytosol 35.25 78.79
VIT_04s0044g00580.t01 Wine grape extracellular 61.19 78.48
PGSC0003DMT400087294 Potato mitochondrion 36.1 77.74
Zm00001d003298_P001 Maize cytosol 34.07 76.43
HORVU5Hr1G039850.3 Barley mitochondrion 59.49 75.48
Zm00001d004087_P001 Maize cytosol 26.1 71.3
PGSC0003DMT400022210 Potato cytosol 43.39 69.57
PGSC0003DMT400022205 Potato cytosol 42.71 68.85
PGSC0003DMT400074882 Potato cytosol 42.71 68.11
PGSC0003DMT400074887 Potato cytosol 40.85 65.14
PGSC0003DMT400088088 Potato cytosol 21.02 63.92
Zm00001d022558_P001 Maize cytosol 29.15 44.22
Zm00001d034421_P004 Maize plastid 29.66 37.39
Zm00001d027326_P001 Maize cytosol, extracellular, nucleus 26.61 35.44
Zm00001d017106_P001 Maize cytosol 24.92 33.95
Zm00001d049629_P002 Maize nucleus 20.34 32.61
Zm00001d050981_P001 Maize cytosol 24.58 31.59
Zm00001d014112_P003 Maize cytosol 21.53 30.75
Zm00001d024059_P002 Maize cytosol 21.02 28.84
Zm00001d008652_P001 Maize endoplasmic reticulum, plastid 10.85 27.71
Protein Annotations
EntrezGene:100304239MapMan:20.2.1Gene3D:3.30.420.40Gene3D:3.90.640.10UniProt:A0A1D6EHT1InterPro:Actin
InterPro:Actin/actin-like_CSInterPro:Actin_CSncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0005488
GO:GO:0005524InterPro:Myb/SANT-like_domProteinID:ONM19688.1PFAM:PF00022PFAM:PF12776PRINTS:PR00190
ScanProsite:PS00406ScanProsite:PS00432ScanProsite:PS01132PANTHER:PTHR11937PANTHER:PTHR11937:SF252SMART:SM00268
SUPFAM:SSF53067UniParc:UPI0008445CE9EnsemblPlantsGene:Zm00001d004855EnsemblPlants:Zm00001d004855_P002EnsemblPlants:Zm00001d004855_T002SEG:seg
Description
Actin-7
Coordinates
chr2:-:144883042..144890090
Molecular Weight (calculated)
65895.4 Da
IEP (calculated)
5.371
GRAVY (calculated)
-0.479
Length
590 amino acids
Sequence
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: SFTTSAEREI VRDIKEKLAY VALEYDQELE NAKSSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSFIG MEAPGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KAEYDESGPG IVHRKMDILE GSIAVRGRGK NKRKWIPVED
401: DELIKALVDV SLDPRWRSDG SFKNGYTSVL EARLAEKLPD SKISATPHIE SRLRYFKTKY SALEQMLNKS GFTWDPTKKM IQCEKQQYET HCKNNPDAKG
501: LYGVSFPYYD ELSMVYSKDM ATGEGAEDMT DAVQNLEEEL VRVNANDEED GEDMTSVETP RRSVDSTSSS SKKRKKEWKG KKTSSSDPMK
Best Arabidopsis Sequence Match ( AT2G37620.2 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.