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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d019635_P001 Maize cytosol 67.88 94.93
Zm00001d016605_P001 Maize cytosol 72.54 88.61
Zm00001d016508_P001 Maize cytosol 60.62 84.78
Zm00001d019396_P001 Maize cytosol 70.47 80.95
Zm00001d003298_P001 Maize cytosol 91.19 66.92
Os01t0866100-01 Rice plasma membrane 69.43 66.01
Zm00001d004087_P001 Maize cytosol 68.39 61.11
PGSC0003DMT400088088 Potato cytosol 58.55 58.25
Zm00001d007792_P001 Maize cytosol 73.58 53.79
GSMUA_Achr5P29190_001 Banana cytosol 95.34 52.87
GSMUA_Achr9P08850_001 Banana cytosol 95.34 52.72
GSMUA_Achr11P... Banana cytosol 94.3 52.15
Solyc01g104770.2.1 Tomato nucleus 97.41 49.87
TraesCS5D01G132200.1 Wheat golgi 95.85 49.87
VIT_12s0178g00200.t01 Wine grape cytosol 96.37 49.34
GSMUA_Achr9P03170_001 Banana cytosol 95.85 49.2
GSMUA_Achr7P10410_001 Banana cytosol 95.85 49.07
TraesCS1D01G020000.1 Wheat cytosol 95.85 49.07
TraesCS5B01G124100.1 Wheat cytosol 95.85 49.07
PGSC0003DMT400047481 Potato cytosol 95.85 49.07
EES08028 Sorghum cytosol 95.85 49.07
Zm00001d053177_P004 Maize cytosol 95.85 49.07
GSMUA_Achr10P... Banana cytosol 95.85 49.07
PGSC0003DMT400010174 Potato cytosol 95.85 49.07
GSMUA_Achr6P25350_001 Banana cytosol 95.85 49.07
Os11t0163100-01 Rice nucleus, plasma membrane, plastid 95.85 49.07
Zm00001d011086_P005 Maize cytosol 95.85 49.07
Os05t0106600-01 Rice nucleus 95.85 49.07
Os01t0964133-01 Rice plasma membrane 95.85 49.07
KXG23031 Sorghum cytosol 95.85 49.07
TraesCS1B01G024500.1 Wheat golgi, nucleus 95.85 49.07
KXG21029 Sorghum cytosol 95.85 49.07
Zm00001d035720_P002 Maize cytosol 95.85 49.07
GSMUA_Achr2P16160_001 Banana cytosol 95.85 49.07
TraesCS5B01G516100.1 Wheat cytosol 95.34 48.81
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 95.34 48.81
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 95.34 48.81
HORVU5Hr1G117900.1 Barley cytosol 95.34 48.81
GSMUA_Achr3P02960_001 Banana cytosol 95.34 48.81
PGSC0003DMT400071331 Potato cytosol 95.34 48.81
TraesCS5D01G516200.1 Wheat cytosol 95.34 48.81
TraesCS4A01G356100.2 Wheat cytosol 95.34 48.55
GSMUA_Achr8P02660_001 Banana cytosol 94.82 48.54
PGSC0003DMT400060953 Potato cytosol 94.82 48.54
PGSC0003DMT400060225 Potato cytosol 94.82 48.54
PGSC0003DMT400077954 Potato cytosol 94.82 48.54
GSMUA_Achr8P16150_001 Banana cytosol 94.82 48.54
PGSC0003DMT400049429 Potato cytosol 94.3 48.28
PGSC0003DMT400023026 Potato cytosol 94.3 48.28
EER90564 Sorghum cytosol 94.3 48.28
Zm00001d035722_P007 Maize plasma membrane 95.85 48.05
Os03t0836000-01 Rice plasma membrane, plastid 93.78 48.01
PGSC0003DMT400001169 Potato cytosol 93.78 47.88
GSMUA_Achr11P... Banana cytosol 93.26 47.75
Zm00001d012277_P001 Maize cytosol 92.75 47.61
EES01810 Sorghum cytosol 92.75 47.61
Os05t0438800-01 Rice plasma membrane, plastid 92.75 47.61
KXG21030 Sorghum cytosol 95.85 47.56
Zm00001d010159_P002 Maize extracellular, plasma membrane 92.23 47.34
TraesCS1A01G274400.1 Wheat golgi 91.71 47.07
EES19603 Sorghum cytosol 91.71 47.07
HORVU1Hr1G074350.1 Barley cytosol 91.71 47.07
TraesCS1B01G283900.1 Wheat cytosol 91.71 47.07
TraesCS1D01G274400.1 Wheat cytosol 91.71 47.07
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 91.19 46.81
Zm00001d034761_P002 Maize cytosol 94.3 46.43
TraesCS1A01G020500.2 Wheat cytosol 95.85 45.45
HORVU1Hr1G002840.6 Barley plasma membrane 95.85 45.45
TraesCS5A01G124300.2 Wheat golgi 95.85 45.23
GSMUA_Achr10P... Banana cytosol 64.25 45.09
GSMUA_Achr2P08030_001 Banana cytosol 80.31 44.29
Zm00001d011087_P001 Maize plastid 95.85 40.75
PGSC0003DMT400087294 Potato mitochondrion 55.44 39.05
PGSC0003DMT400022210 Potato cytosol 74.09 38.86
PGSC0003DMT400022205 Potato cytosol 73.58 38.8
PGSC0003DMT400074882 Potato cytosol 74.09 38.65
HORVU5Hr1G039850.3 Barley mitochondrion 88.08 36.56
PGSC0003DMT400074887 Potato cytosol 67.36 35.14
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 95.34 31.19
Zm00001d034421_P004 Maize plastid 70.47 29.06
Zm00001d008746_P001 Maize cytosol 34.2 24.0
PGSC0003DMT400052197 Potato cytosol 48.7 23.56
GSMUA_Achr6P34320_001 Banana cytosol 28.5 22.54
PGSC0003DMT400027956 Potato cytosol 41.45 18.56
PGSC0003DMT400056033 Potato cytosol 40.41 17.93
PGSC0003DMT400019210 Potato cytosol 33.16 17.78
PGSC0003DMT400038724 Potato cytosol 31.09 13.7
PGSC0003DMT400076501 Potato cytosol 1.55 1.5
Protein Annotations
Gene3D:2.30.36.70Gene3D:3.30.420.40MapMan:35.1InterPro:ActinInterPro:Actin/actin-like_CSInterPro:Actin_CS
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005856UniProt:M1CWV5PFAM:PF00022EnsemblPlantsGene:PGSC0003DMG400029745
PGSC:PGSC0003DMG400029745EnsemblPlants:PGSC0003DMT400076499PRINTS:PR00190ScanProsite:PS00406ScanProsite:PS01132PANTHER:PTHR11937
PANTHER:PTHR11937:SF355SMART:SM00268SUPFAM:SSF53067UniParc:UPI000294D54E::
Description
Actin-101 [Source:PGSC_GENE;Acc:PGSC0003DMG400029745]
Coordinates
chr1:-:81556874..81559202
Molecular Weight (calculated)
21241.7 Da
IEP (calculated)
6.146
GRAVY (calculated)
-0.078
Length
193 amino acids
Sequence
(BLAST)
001: MADAEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVSP
101: DEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRCFILK ICR
Best Arabidopsis Sequence Match ( AT3G12110.1 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN TPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDY LMKILTERGY
201: SFTTSAEREI VRDVKEKLAY IALDYEQEME TANTSSSVEK SYELPDGQVI TIGGERFRCP EVLFQPSLVG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT11Actin-11 [Source:UniProtKB/Swiss-Prot;Acc:P53496]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.