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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003298_P001
Zm00001d004087_P001
Zm00001d004855_P002
Zm00001d007792_P001
Zm00001d008517_P001
Zm00001d008746_P001
Zm00001d008768_P001
Zm00001d009747_P001
Zm00001d010159_P002
Zm00001d011086_P005
Zm00001d011087_P001
Zm00001d011131_P001
Zm00001d011132_P001
Zm00001d011202_P002
Zm00001d012277_P001
Zm00001d013141_P001
Zm00001d014053_P001
Zm00001d016508_P001
Zm00001d016605_P001
Zm00001d019396_P001
Zm00001d019635_P001
Zm00001d029295_P001
Zm00001d029656_P003
Zm00001d034024_P001
Zm00001d034326_P001
Zm00001d034421_P004
Zm00001d034761_P002
Zm00001d035720_P002
Zm00001d035722_P007
Zm00001d038078_P001
Zm00001d038846_P001
Zm00001d039163_P002
Zm00001d040038_P001
Zm00001d042097_P001
Zm00001d042731_P002
Zm00001d044301_P001
Zm00001d047714_P001
Zm00001d053177_P004

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49240.1 Zm00001d009747_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011131_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011132_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011202_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d038846_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d039163_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d044301_P001 AT1G72770.1 19033529
AT5G09810.1 Zm00001d013141_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d029656_P003 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034024_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034326_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d008517_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d008768_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d014053_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d029295_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d038078_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d040038_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d042097_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d047714_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d003298_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004855_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d007792_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d008746_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d010159_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011086_P005 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d012277_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016508_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016605_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019396_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019635_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034421_P004 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034761_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035720_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035722_P007 AT5G09810.1 21798944
AT5G09810.1 Zm00001d042731_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d053177_P004 AT5G09810.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG21029 Sorghum cytosol 100.0 100.0
Zm00001d011086_P005 Maize cytosol 100.0 100.0
Os05t0106600-01 Rice nucleus 98.94 98.94
TraesCS1B01G024500.1 Wheat golgi, nucleus 98.41 98.41
TraesCS1D01G020000.1 Wheat cytosol 98.41 98.41
Zm00001d035722_P007 Maize plasma membrane 100.0 97.92
KRH64098 Soybean cytosol 97.61 97.61
KRH59535 Soybean cytosol 97.61 97.61
KRH43389 Soybean cytosol 97.61 97.61
KRH53856 Soybean endoplasmic reticulum, mitochondrion 85.94 97.59
AT5G09810.1 Thale cress cytosol 97.35 97.35
Zm00001d013873_P001 Maize plasma membrane, plastid 97.35 97.35
Zm00001d053177_P004 Maize cytosol 97.35 97.35
VIT_12s0178g00200.t01 Wine grape cytosol 97.35 97.35
PGSC0003DMT400047481 Potato cytosol 97.08 97.08
CDY21607 Canola cytosol 97.08 97.08
Zm00001d032480_P002 Maize plasma membrane, plastid 97.08 97.08
Solyc03g078400.2.1 Tomato nucleus, plastid 97.08 97.08
CDX69885 Canola cytosol 97.08 97.08
CDY30296 Canola cytosol 90.72 96.88
CDY31972 Canola cytosol 90.72 96.88
CDY40061 Canola cytosol 90.72 96.88
CDX85794 Canola cytosol 90.72 96.88
Bra028615.1-P Field mustard cytosol 96.82 96.82
Bra009081.1-P Field mustard cytosol 90.45 96.6
CDY56544 Canola cytosol 96.55 96.55
PGSC0003DMT400010174 Potato cytosol 96.55 96.55
CDX81140 Canola cytosol 96.55 96.55
Solyc11g005330.1.1 Tomato nucleus 96.55 96.55
Zm00001d033790_P001 Maize cytosol 96.29 96.29
Zm00001d013410_P001 Maize cytosol 96.29 96.29
Bra006033.1-P Field mustard cytosol 96.29 96.29
PGSC0003DMT400076499 Potato cytosol 49.07 95.85
Solyc01g104770.2.1 Tomato nucleus 95.76 95.76
Zm00001d019635_P001 Maize cytosol 35.01 95.65
Zm00001d012277_P001 Maize cytosol 94.43 94.68
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 94.43 94.43
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 94.43 94.43
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 93.1 93.35
Zm00001d016605_P001 Maize cytosol 38.99 93.04
Zm00001d034761_P002 Maize cytosol 96.29 92.6
Solyc04g071260.2.1 Tomato plastid 92.31 92.31
Zm00001d010159_P002 Maize extracellular, plasma membrane 92.04 92.29
CDX99315 Canola cytosol 78.25 91.33
HORVU1Hr1G002840.6 Barley plasma membrane 98.41 91.15
TraesCS1A01G020500.2 Wheat cytosol 98.41 91.15
Bra022356.1-P Field mustard cytosol 77.98 91.02
AT1G49240.1 Thale cress cytosol 90.98 90.98
AT3G18780.3 Thale cress cytosol 90.72 90.72
CDX82326 Canola cytosol 90.72 90.72
CDX92272 Canola cytosol 90.72 90.72
CDX95498 Canola cytosol 90.72 90.72
CDY18545 Canola cytosol 90.72 90.72
CDY61982 Canola cytosol 90.72 90.72
CDX92271 Canola cytosol 75.86 90.22
KXG21030 Sorghum cytosol 89.92 87.15
PGSC0003DMT400076501 Potato cytosol 46.15 87.0
Zm00001d016508_P001 Maize cytosol 31.57 86.23
Zm00001d008746_P001 Maize cytosol 62.07 85.09
Zm00001d011087_P001 Maize plastid 100.0 83.04
Bra037560.1-P Field mustard cytoskeleton, cytosol 77.45 82.72
Zm00001d019396_P001 Maize cytosol 36.6 82.14
Zm00001d007792_P001 Maize cytosol 55.97 79.92
VIT_04s0044g00580.t01 Wine grape extracellular 96.82 79.35
PGSC0003DMT400087294 Potato mitochondrion 56.5 77.74
Zm00001d003298_P001 Maize cytosol 53.32 76.43
Zm00001d004087_P001 Maize cytosol 41.38 72.22
PGSC0003DMT400022210 Potato cytosol 68.44 70.11
PGSC0003DMT400022205 Potato cytosol 67.11 69.13
PGSC0003DMT400074882 Potato cytosol 67.37 68.65
PGSC0003DMT400074887 Potato cytosol 64.46 65.68
PGSC0003DMT400088088 Potato cytosol 32.89 63.92
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 96.55 61.69
Zm00001d022558_P001 Maize cytosol 46.68 45.24
Zm00001d034421_P004 Maize plastid 46.42 37.39
Zm00001d027326_P001 Maize cytosol, extracellular, nucleus 41.64 35.44
Zm00001d017106_P001 Maize cytosol 38.99 33.95
Zm00001d049629_P002 Maize nucleus 32.1 32.88
Zm00001d050981_P001 Maize cytosol 38.73 31.81
Zm00001d014112_P003 Maize cytosol 33.69 30.75
Zm00001d024059_P002 Maize cytosol 33.69 29.53
Zm00001d008652_P001 Maize endoplasmic reticulum, plastid 16.98 27.71
Protein Annotations
EntrezGene:100191561EntrezGene:103629275EntrezGene:103629276EntrezGene:103635981MapMan:20.2.1Gene3D:3.30.420.40
Gene3D:3.90.640.10ProteinID:AQK79519.1ProteinID:AQK79520.1ProteinID:AQK79521.1ProteinID:AQK79522.1ProteinID:AQK79526.1
ProteinID:AQK79527.1ProteinID:AQK79529.1ProteinID:AQK79532.1ProteinID:AQK79533.1ProteinID:AQK79534.1ProteinID:AQK95624.1
ProteinID:AQK95625.1ProteinID:AQK95626.1ProteinID:AQK95627.1ProteinID:AQK95628.1ProteinID:AQK95629.1ProteinID:AQK95631.1
ProteinID:AQK95632.1ProteinID:AQK95633.1ProteinID:AQK95634.1ProteinID:AQK95635.1InterPro:ActinInterPro:Actin/actin-like_CS
InterPro:Actin_CSUniProt:B4F989EMBL:BT033677EMBL:BT039238EMBL:BT054543EMBL:BT064389
EMBL:BT066790EMBL:EU961034EMBL:EU969521GO:GO:0000166GO:GO:0003674GO:GO:0005488
GO:GO:0005524PFAM:PF00022PRINTS:PR00190ScanProsite:PS00406ScanProsite:PS00432ScanProsite:PS01132
PANTHER:PTHR11937PANTHER:PTHR11937:SF355SMART:SM00268SUPFAM:SSF53067UniParc:UPI000044ED0EEnsemblPlantsGene:Zm00001d035720
EnsemblPlants:Zm00001d035720_P002EnsemblPlants:Zm00001d035720_T002::::
Description
Actin-7
Coordinates
chr6:-:42943938..42947112
Molecular Weight (calculated)
41728.1 Da
IEP (calculated)
5.061
GRAVY (calculated)
-0.189
Length
377 amino acids
Sequence
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVSN WDDMEKIWHH TFYNELRVAP
101: EEHPVLLTEA PLNPKANREK MTQIMFETFN VPAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDS LMKILTERGY
201: SFTTSAEREI VRDIKEKLAY IALDYEQELE TAKNSSSVEK SYELPDGQVI TIGAERFRCP EVLFQPSMIG MEAAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGSTMFPG IADRMSKEIT SLAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIS KEEYDESGPA IVHRKCF
Best Arabidopsis Sequence Match ( AT2G37620.2 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.