Factsheet for Zm00001d022558_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008652_P001
Zm00001d017106_P001
Zm00001d049629_P002
Zm00001d050981_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G27000.1	Zm00001d008652_P001	AT1G13180.1	17267444
AT3G27000.1	Zm00001d017106_P001	AT1G13180.1	17267444
AT3G27000.1	Zm00001d049629_P002	AT1G13180.1	17267444
AT3G27000.1	Zm00001d050981_P001	AT1G13180.1	17267444

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99952	Sorghum	cytosol	99.74	99.74
TraesCS3D01G362400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	96.14	96.14
GSMUA_AchrUn_...	Banana	cytosol	94.34	94.34
TraesCS3A01G369400.1	Wheat	cytosol	95.89	93.25
VIT_14s0068g01630.t01	Wine grape	cytosol	91.52	91.52
KRG94584	Soybean	cytosol	91.0	91.0
Solyc02g094320.2.1	Tomato	cytosol	90.23	90.23
KRH06905	Soybean	cytosol	90.23	90.23
Bra039097.1-P	Field mustard	cytosol	89.72	89.72
CDY20066	Canola	cytosol	89.72	89.72
Bra025243.1-P	Field mustard	cytosol	84.32	89.62
CDY00172	Canola	cytosol	89.46	89.46
AT3G27000.1	Thale cress	cytosol	89.46	89.46
TraesCS3B01G401300.2	Wheat	cytosol	95.63	89.42
CDY52404	Canola	cytosol	89.46	88.1
CDY13674	Canola	cytosol	89.46	88.1
PGSC0003DMT400052197	Potato	cytosol	85.86	83.71
HORVU4Hr1G007240.3	Barley	cytosol	93.06	77.19
Zm00001d016508_P001	Maize	cytosol	17.48	49.28
Zm00001d019396_P001	Maize	cytosol	20.82	48.21
Zm00001d035720_P002	Maize	cytosol	45.24	46.68
Zm00001d011086_P005	Maize	cytosol	45.24	46.68
Zm00001d019635_P001	Maize	cytosol	16.45	46.38
Zm00001d016605_P001	Maize	cytosol	18.77	46.2
Zm00001d032480_P002	Maize	plasma membrane, plastid	44.73	46.15
Zm00001d013873_P001	Maize	plasma membrane, plastid	44.73	46.15
Zm00001d033790_P001	Maize	cytosol	44.47	45.89
Zm00001d053177_P004	Maize	cytosol	44.47	45.89
Zm00001d013410_P001	Maize	cytosol	44.47	45.89
Zm00001d012277_P001	Maize	cytosol	44.22	45.74
Zm00001d035722_P007	Maize	plasma membrane	45.24	45.71
Zm00001d042731_P002	Maize	extracellular, plasma membrane, plastid	43.96	45.48
Zm00001d010159_P002	Maize	extracellular, plasma membrane	43.44	44.95
Zm00001d034761_P002	Maize	cytosol	44.47	44.13
Zm00001d003298_P001	Maize	cytosol	27.76	41.06
Zm00001d007792_P001	Maize	cytosol	26.99	39.77
Zm00001d008746_P001	Maize	cytosol	27.76	39.27
Zm00001d011087_P001	Maize	plastid	45.24	38.77
Zm00001d004087_P001	Maize	cytosol	21.08	37.96
Zm00001d017106_P001	Maize	cytosol	34.45	30.95
Zm00001d050981_P001	Maize	cytosol	34.96	29.63
Zm00001d004855_P002	Maize	cytoskeleton, cytosol, nucleus	44.22	29.15
Zm00001d049629_P002	Maize	nucleus	25.96	27.45
Zm00001d027326_P001	Maize	cytosol, extracellular, nucleus	30.85	27.09
Zm00001d024059_P002	Maize	cytosol	27.51	24.88
Zm00001d014112_P003	Maize	cytosol	25.19	23.73
Zm00001d008652_P001	Maize	endoplasmic reticulum, plastid	12.34	20.78
Zm00001d034421_P004	Maize	plastid	23.14	19.23

Protein Annotations

EntrezGene:103633595	MapMan:20.2.2.1.1	Gene3D:3.30.420.40	Gene3D:3.90.640.10	UniProt:A0A1D6IP15	InterPro:Actin
InterPro:Arp2	GO:GO:0000166	GO:GO:0000902	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0005885	GO:GO:0007015
GO:GO:0008150	GO:GO:0009653	GO:GO:0009825	GO:GO:0009987	GO:GO:0010090	GO:GO:0016043
GO:GO:0016049	GO:GO:0030154	GO:GO:0034314	GO:GO:0040007	ProteinID:ONM61004.1	PFAM:PF00022
PRINTS:PR00190	PANTHER:PTHR11937	PANTHER:PTHR11937:SF149	SMART:SM00268	SUPFAM:SSF53067	UniParc:UPI000220942B
EnsemblPlantsGene:Zm00001d022558	EnsemblPlants:Zm00001d022558_P001	EnsemblPlants:Zm00001d022558_T001	:	:	:

Description

Actin-related protein 2

Coordinates

chr7:-:180004346..180012189

Molecular Weight (calculated)

44009.1 Da

IEP (calculated)

5.329

GRAVY (calculated)

-0.216

Length

389 amino acids

Sequence
(BLAST)

001: MESRNVVVCD NGTGYVKCGF AGENFPTSVF PCVVGRPLLR YEESLQEQEL TDIVVGAACA DLRHQLDVSY PVTNGIVQNW DDMGHIWDHA FYSELKVDPS
101: ECKILLTDPP LNPVKNREKM IETMFEKYNF AGVFIQIQAV LSLYAQGLLT GLVIDSGDGV THVVPVVDGY SYPHLTKRMN VAGRHITSYL VDLLSRRGYA
201: MNKSADFETV REIKEKLCYI SYDYKREYQL GLETTILVKS YTLPDGRVIK VGTERFQAPE ALFTPELIDV EGDGMADMAF RCIQEMDIDN RMTLYQHIVL
301: SGGSTMYPGL PSRLEKEILD RYLDVVLKGN KDGLKKLRLR IEDPPRRKHM VYLGGAVLAG IMKDAPEFWI TRQEYQEEGV ACLRKCGQS

Best Arabidopsis Sequence Match ( AT3G27000.1 )
(BLAST)

001: MDNKNVVVCD NGTGYVKCGF AGENFPTSVF PCVVGRPLLR YEESLMEQQV KDIVVGETCS ELRHQLDINY PVHNGIVQNW DDMEHVWDHA FYNELKINPS
101: DCKILLTDPP LNPSKNREKM IETMFEKYNF AGVFIQIQAV LTLYAQGLLT GLVIDSGDGV THVVPVVDGY SFPHLTKRMN VAGRHITAYL VDLLSRRGYA
201: MNKTADFETV REIKEKLCYI SYDYKRESQL GLETTILVKN YTLPDGRVIK VGTERFQAPE ALFTPELIDV EGDGMADMVF RCIQEMDIDN RMMLYQHIVL
301: SGGSTMYPGL PSRLEKEIQD RYLDTVLKGN KDGLKKLRLR IEDPPRRKHM VYLGGAVLAG IMKDAPEFWI NREDYMEEGI NCLNKMSQA

Arabidopsis Description

ARP2Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.