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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003298_P001
Zm00001d004087_P001
Zm00001d004855_P002
Zm00001d007792_P001
Zm00001d008517_P001
Zm00001d008746_P001
Zm00001d008768_P001
Zm00001d009747_P001
Zm00001d010159_P002
Zm00001d011086_P005
Zm00001d011087_P001
Zm00001d011131_P001
Zm00001d011132_P001
Zm00001d011202_P002
Zm00001d012277_P001
Zm00001d013141_P001
Zm00001d014053_P001
Zm00001d016508_P001
Zm00001d016605_P001
Zm00001d019396_P001
Zm00001d019635_P001
Zm00001d029295_P001
Zm00001d029656_P003
Zm00001d034024_P001
Zm00001d034326_P001
Zm00001d034421_P004
Zm00001d034761_P002
Zm00001d035720_P002
Zm00001d035722_P007
Zm00001d038078_P001
Zm00001d038846_P001
Zm00001d039163_P002
Zm00001d040038_P001
Zm00001d042097_P001
Zm00001d042731_P002
Zm00001d044301_P001
Zm00001d047714_P001
Zm00001d053177_P004

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G49240.1 Zm00001d009747_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011131_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011132_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d011202_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d038846_P001 AT1G72770.1 19033529
AT1G49240.1 Zm00001d039163_P002 AT1G72770.1 19033529
AT1G49240.1 Zm00001d044301_P001 AT1G72770.1 19033529
AT5G09810.1 Zm00001d013141_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d029656_P003 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034024_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d034326_P001 AT2G31200.1 21798944
AT5G09810.1 Zm00001d008517_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d008768_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d014053_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d029295_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d038078_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d040038_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d042097_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d047714_P001 AT3G18060.1 21798944
AT5G09810.1 Zm00001d003298_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d004855_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d007792_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d008746_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d010159_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011086_P005 AT5G09810.1 21798944
AT5G09810.1 Zm00001d011087_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d012277_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016508_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d016605_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019396_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d019635_P001 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034421_P004 AT5G09810.1 21798944
AT5G09810.1 Zm00001d034761_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035720_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d035722_P007 AT5G09810.1 21798944
AT5G09810.1 Zm00001d042731_P002 AT5G09810.1 21798944
AT5G09810.1 Zm00001d053177_P004 AT5G09810.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01810 Sorghum cytosol 98.94 98.94
Zm00001d042731_P002 Maize extracellular, plasma membrane, plastid 98.67 98.67
GSMUA_Achr9P03170_001 Banana cytosol 95.21 95.21
GSMUA_Achr5P29190_001 Banana cytosol 88.03 95.11
GSMUA_Achr10P... Banana cytosol 95.21 94.96
GSMUA_Achr2P16160_001 Banana cytosol 94.95 94.69
Zm00001d011086_P005 Maize cytosol 94.68 94.43
VIT_12s0178g00200.t01 Wine grape cytosol 94.68 94.43
Zm00001d035720_P002 Maize cytosol 94.68 94.43
GSMUA_Achr8P16150_001 Banana cytosol 94.68 94.43
GSMUA_Achr8P02660_001 Banana cytosol 94.68 94.43
GSMUA_Achr9P08850_001 Banana cytosol 87.5 94.27
GSMUA_Achr6P34320_001 Banana cytosol 61.17 94.26
Zm00001d019635_P001 Maize cytosol 34.57 94.2
PGSC0003DMT400010174 Potato cytosol 94.41 94.16
PGSC0003DMT400047481 Potato cytosol 94.41 94.16
Zm00001d032480_P002 Maize plasma membrane, plastid 94.41 94.16
GSMUA_Achr6P25350_001 Banana cytosol 94.41 94.16
GSMUA_Achr7P10410_001 Banana cytosol 94.41 94.16
Solyc11g005330.1.1 Tomato nucleus 94.41 94.16
KRH43389 Soybean cytosol 94.41 94.16
Solyc03g078400.2.1 Tomato nucleus, plastid 94.41 94.16
KRH59535 Soybean cytosol 94.41 94.16
AT5G09810.1 Thale cress cytosol 94.41 94.16
Zm00001d053177_P004 Maize cytosol 94.41 94.16
KRH53856 Soybean endoplasmic reticulum, mitochondrion 82.98 93.98
CDY56544 Canola cytosol 94.15 93.9
GSMUA_Achr3P02960_001 Banana cytosol 94.15 93.9
CDY21607 Canola cytosol 94.15 93.9
Zm00001d013410_P001 Maize cytosol 94.15 93.9
Zm00001d013873_P001 Maize plasma membrane, plastid 94.15 93.9
Zm00001d033790_P001 Maize cytosol 94.15 93.9
CDX81140 Canola cytosol 94.15 93.9
CDX69885 Canola cytosol 94.15 93.9
KRH64098 Soybean cytosol 94.15 93.9
Bra028615.1-P Field mustard cytosol 93.88 93.63
Bra006033.1-P Field mustard cytosol 93.88 93.63
CDY40061 Canola cytosol 87.77 93.48
CDY31972 Canola cytosol 87.77 93.48
CDY30296 Canola cytosol 87.77 93.48
CDX85794 Canola cytosol 87.77 93.48
GSMUA_Achr11P... Banana cytosol 86.7 93.41
GSMUA_Achr11P... Banana cytosol 93.62 93.37
Zm00001d010159_P002 Maize extracellular, plasma membrane 93.35 93.35
Bra009081.1-P Field mustard cytosol 87.5 93.2
Solyc01g104770.2.1 Tomato nucleus 93.35 93.1
PGSC0003DMT400076499 Potato cytosol 47.61 92.75
Zm00001d035722_P007 Maize plasma membrane 94.68 92.47
KRH43946 Soybean endoplasmic reticulum, mitochondrion, nucleus 91.22 90.98
KRH10484 Soybean endoplasmic reticulum, mitochondrion, nucleus 91.22 90.98
Zm00001d008746_P001 Maize cytosol 66.49 90.91
AT3G18780.3 Thale cress cytosol 90.43 90.19
Solyc04g071260.2.1 Tomato plastid 90.43 90.19
CDY18545 Canola cytosol 90.43 90.19
CDY61982 Canola cytosol 90.43 90.19
CDX95498 Canola cytosol 90.43 90.19
CDX92272 Canola cytosol 90.43 90.19
CDX99315 Canola cytosol 77.39 90.09
Zm00001d034761_P002 Maize cytosol 93.88 90.05
AT1G49240.1 Thale cress cytosol 90.16 89.92
CDX82326 Canola cytosol 90.16 89.92
Zm00001d016605_P001 Maize cytosol 37.77 89.87
Zm00001d016508_P001 Maize cytosol 32.98 89.86
Bra022356.1-P Field mustard cytosol 76.86 89.47
CDX92271 Canola cytosol 75.27 89.27
GSMUA_Achr10P... Banana cytosol 62.23 85.09
Zm00001d019396_P001 Maize cytosol 37.77 84.52
PGSC0003DMT400076501 Potato cytosol 44.95 84.5
Zm00001d007792_P001 Maize cytosol 58.78 83.71
Bra037560.1-P Field mustard cytoskeleton, cytosol 77.39 82.44
Zm00001d011087_P001 Maize plastid 94.68 78.41
VIT_04s0044g00580.t01 Wine grape extracellular 94.41 77.17
PGSC0003DMT400087294 Potato mitochondrion 55.59 76.28
Zm00001d003298_P001 Maize cytosol 52.13 74.52
Zm00001d004087_P001 Maize cytosol 40.96 71.3
PGSC0003DMT400022210 Potato cytosol 67.82 69.29
PGSC0003DMT400022205 Potato cytosol 65.16 66.94
PGSC0003DMT400074882 Potato cytosol 65.43 66.49
PGSC0003DMT400074887 Potato cytosol 62.23 63.24
PGSC0003DMT400088088 Potato cytosol 32.18 62.37
Zm00001d004855_P002 Maize cytoskeleton, cytosol, nucleus 93.88 59.83
Zm00001d022558_P001 Maize cytosol 45.74 44.22
Zm00001d034421_P004 Maize plastid 45.21 36.32
Zm00001d027326_P001 Maize cytosol, extracellular, nucleus 41.49 35.21
Zm00001d017106_P001 Maize cytosol 38.3 33.26
Zm00001d049629_P002 Maize nucleus 31.65 32.34
Zm00001d050981_P001 Maize cytosol 37.77 30.94
Zm00001d014112_P003 Maize cytosol 33.51 30.51
Zm00001d024059_P002 Maize cytosol 34.04 29.77
Zm00001d008652_P001 Maize endoplasmic reticulum, plastid 16.76 27.27
Protein Annotations
EntrezGene:100281811MapMan:20.2.1Gene3D:3.30.420.40Gene3D:3.90.640.10ProteinID:AQK99257.1ProteinID:AQK99258.1
ProteinID:AQK99259.1InterPro:ActinInterPro:Actin/actin-like_CSInterPro:Actin_CSUniProt:B6SZ83EMBL:BT086225
EMBL:EU958048GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005524PFAM:PF00022
PRINTS:PR00190ScanProsite:PS00406ScanProsite:PS00432ScanProsite:PS01132PANTHER:PTHR11937PANTHER:PTHR11937:SF205
SMART:SM00268SUPFAM:SSF53067UniParc:UPI000182C587EnsemblPlantsGene:Zm00001d012277EnsemblPlants:Zm00001d012277_P001EnsemblPlants:Zm00001d012277_T001
Description
Actin-7
Coordinates
chr8:-:171775071..171778105
Molecular Weight (calculated)
41636.0 Da
IEP (calculated)
4.969
GRAVY (calculated)
-0.188
Length
376 amino acids
Sequence
(BLAST)
001: MAEEDVQPLV CDNGTGMVKA GFAGDDAPRA VFPSIVGRPR HTGVMVGMGQ KDAYVGDEAQ SKRGILTLKY PIEHGIVGNW DDMEKIWHHT FYNELRVAPE
101: EHPILLTEAP LNPKANREKM TQIMFETFNC PAMYVAIQAV LSLYASGRTT GIVLDSGDGV SHTVPIYEGY TLPHAILRLD LAGRDLTDNL MKILTERGYS
201: FTTTAEREIV RDIKEKLAYV ALDYEQELET ARTSSSVEKS YELPDGQVIT IGAERFRCPE VLFQPSFIGM ESAGIHEATY NSIMKCDVDI RKDLYGNVVL
301: SGGSTMFPGI GDRMSKEITA LAPSSMKVKV VAPPERKYSV WIGGSILASL STFQQMWISK EEYDESGPGI VHMKCF
Best Arabidopsis Sequence Match ( AT2G37620.2 )
(BLAST)
001: MADGEDIQPL VCDNGTGMVK AGFAGDDAPR AVFPSIVGRP RHTGVMVGMG QKDAYVGDEA QSKRGILTLK YPIEHGIVNN WDDMEKIWHH TFYNELRVAP
101: EEHPILLTEA PLNPKANREK MTQIMFETFN APAMYVAIQA VLSLYASGRT TGIVLDSGDG VSHTVPIYEG YALPHAILRL DLAGRDLTDA LMKILTERGY
201: SFTTTAEREI VRDIKEKLCY IALDYEQELE TAKTSSSVEK NYELPDGQVI TIGSERFRCP EVLYQPSMIG MENAGIHETT YNSIMKCDVD IRKDLYGNIV
301: LSGGTTMFPG IADRMSKEIT ALAPSSMKIK VVAPPERKYS VWIGGSILAS LSTFQQMWIA KAEYDESGPS IVHRKCF
Arabidopsis Description
ACT1Actin-3 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ47]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.