Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- extracellular 4
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
29344831
nucleus: 29344831 |
gfp PMID:
29344831
doi
Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China., Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. aumdyms@sicau.edu.cn., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. zhaoyang@sibs.ac.cn.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 32.89 | 54.44 |
| Solyc08g062640.2.1 | Tomato | cytosol | 44.3 | 49.25 |
| Zm00001d038846_P001 | Maize | cytosol, nucleus | 69.8 | 28.11 |
| KXG22422 | Sorghum | cytosol, nucleus, plastid | 69.13 | 27.11 |
| HORVU1Hr1G080290.6 | Barley | cytosol | 65.77 | 25.52 |
| TraesCS1A01G358600.1 | Wheat | cytosol | 63.76 | 25.0 |
| TraesCS1B01G375100.1 | Wheat | cytosol | 63.09 | 24.67 |
| TraesCS1D01G363500.1 | Wheat | cytosol | 63.09 | 24.61 |
| CDX96761 | Canola | cytosol | 48.32 | 20.57 |
| CDX83901 | Canola | cytosol | 46.98 | 20.0 |
| Zm00001d009747_P001 | Maize | cytosol | 54.36 | 19.15 |
| Zm00001d039163_P002 | Maize | cytosol | 53.69 | 18.65 |
| Bra016595.1-P | Field mustard | cytosol | 50.34 | 18.29 |
| Zm00001d011202_P002 | Maize | cytosol, peroxisome, plastid | 52.35 | 17.81 |
| Zm00001d044301_P001 | Maize | cytosol, nucleus | 53.02 | 16.32 |
| Zm00001d005609_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 36.24 | 15.43 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 48.99 | 15.37 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 48.99 | 15.08 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 48.99 | 15.08 |
| Zm00001d028574_P001 | Maize | nucleus | 39.6 | 14.9 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 50.34 | 14.76 |
| Zm00001d009626_P001 | Maize | nucleus | 36.91 | 14.67 |
| Zm00001d020100_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 34.9 | 14.53 |
| KRH52222 | Soybean | cytosol | 53.02 | 14.52 |
| KRH61549 | Soybean | cytosol | 53.02 | 14.52 |
| CDY26234 | Canola | cytosol | 47.65 | 14.31 |
| PGSC0003DMT400006608 | Potato | plastid | 52.35 | 14.31 |
| AT1G72770.1 | Thale cress | cytosol | 48.99 | 14.29 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 52.35 | 14.23 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 51.01 | 14.18 |
| AT1G17550.1 | Thale cress | cytosol | 48.32 | 14.09 |
| CDY48313 | Canola | cytosol | 46.98 | 13.97 |
| Zm00001d042886_P001 | Maize | nucleus | 38.26 | 13.97 |
| KRH15739 | Soybean | cytosol | 51.68 | 13.82 |
| KRH05300 | Soybean | cytosol | 51.68 | 13.8 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 51.01 | 13.79 |
| Bra025964.1-P | Field mustard | cytosol | 46.98 | 13.78 |
| Zm00001d012401_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 37.58 | 13.56 |
| Zm00001d011495_P001 | Maize | cytosol | 34.9 | 13.2 |
| Zm00001d044015_P001 | Maize | cytosol | 34.9 | 12.68 |
| Zm00001d025055_P001 | Maize | cytosol | 32.89 | 10.56 |
| Zm00001d004357_P001 | Maize | nucleus | 32.21 | 8.82 |
| Zm00001d007529_P001 | Maize | nucleus | 24.16 | 7.06 |
| Solyc08g062650.2.1 | Tomato | extracellular | 16.78 | 5.33 |
| Zm00001d011131_P001 | Maize | cytosol | 6.71 | 3.55 |
| Zm00001d007558_P001 | Maize | cytosol | 2.68 | 3.54 |
| Zm00001d007533_P001 | Maize | extracellular | 2.01 | 2.83 |
| Zm00001d007530_P001 | Maize | cytosol | 2.68 | 2.3 |
| Zm00001d007554_P001 | Maize | cytosol | 2.68 | 1.65 |
| Zm00001d007532_P001 | Maize | cytosol | 0.67 | 1.14 |
| Zm00001d007528_P001 | Maize | extracellular, vacuole | 1.34 | 0.79 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | Gene3D:3.60.40.10 | MapMan:35.1 | ProteinID:AQK95818.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR001932 | InterPro:IPR036457 | UniProt:K7V6D0 |
| EMBL:KJ855132 | PFAM:PF00481 | InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 |
| PANTHER:PTHR13832 | PANTHER:PTHR13832:SF517 | SUPFAM:SSF81606 | UniParc:UPI0002212268 | EnsemblPlantsGene:Zm00001d011132 | EnsemblPlants:Zm00001d011132_P001 |
| EnsemblPlants:Zm00001d011132_T001 | : | : | : | : | : |
Description
Protein phosphatase 2C 16
Coordinates
chr8:+:140008931..140009959
Molecular Weight (calculated)
16236.3 Da
IEP (calculated)
7.347
GRAVY (calculated)
-0.226
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWFLQVALA AWTMPNHQWD RYLKPFVIPK PEVTVVPRAK DDDCLILASD GLWDVVTNEE ACKAARRQIQ VWHKNNGAAG ASWSLCDEGD GSTTDPAAQA
101: AADYLVRVAL KKGTEDNVTV IVVDLKPRKK SSGATRSIGR SGSITVELS
101: AADYLVRVAL KKGTEDNVTV IVVDLKPRKK SSGATRSIGR SGSITVELS
001: MEEVSPAIAG PFRPFSETQM DFTGIRLGKG YCNNQYSNQD SENGDLMVSL PETSSCSVSG SHGSESRKVL ISRINSPNLN MKESAAADIV VVDISAGDEI
101: NGSDITSEKK MISRTESRSL FEFKSVPLYG FTSICGRRPE MEDAVSTIPR FLQSSSGSML DGRFDPQSAA HFFGVYDGHG GSQVANYCRE RMHLALAEEI
201: AKEKPMLCDG DTWLEKWKKA LFNSFLRVDS EIESVAPETV GSTSVVAVVF PSHIFVANCG DSRAVLCRGK TALPLSVDHK PDREDEAARI EAAGGKVIQW
301: NGARVFGVLA MSRSIGDRYL KPSIIPDPEV TAVKRVKEDD CLILASDGVW DVMTDEEACE MARKRILLWH KKNAVAGDAS LLADERRKEG KDPAAMSAAE
401: YLSKLAIQRG SKDNISVVVV DLKPRRKLKS KPLN
101: NGSDITSEKK MISRTESRSL FEFKSVPLYG FTSICGRRPE MEDAVSTIPR FLQSSSGSML DGRFDPQSAA HFFGVYDGHG GSQVANYCRE RMHLALAEEI
201: AKEKPMLCDG DTWLEKWKKA LFNSFLRVDS EIESVAPETV GSTSVVAVVF PSHIFVANCG DSRAVLCRGK TALPLSVDHK PDREDEAARI EAAGGKVIQW
301: NGARVFGVLA MSRSIGDRYL KPSIIPDPEV TAVKRVKEDD CLILASDGVW DVMTDEEACE MARKRILLWH KKNAVAGDAS LLADERRKEG KDPAAMSAAE
401: YLSKLAIQRG SKDNISVVVV DLKPRRKLKS KPLN
Arabidopsis Description
ABI1Protein phosphatase 2C 56 [Source:UniProtKB/Swiss-Prot;Acc:P49597]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.