Factsheet for PGSC0003DMT400075333

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 2
cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid, secretory
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g096020.1.1	Tomato	cytosol, nucleus, plastid	89.18	94.09
PGSC0003DMT400021210	Potato	cytosol, nucleus, peroxisome	14.74	87.78
VIT_04s0008g01420.t01	Wine grape	cytosol	67.16	65.34
GSMUA_Achr7P24000_001	Banana	cytosol	45.34	61.99
Os01t0583100-01	Rice	cytosol	45.52	61.62
HORVU7Hr1G029040.1	Barley	cytosol, peroxisome	32.46	59.39
Zm00001d011202_P002	Maize	cytosol, peroxisome, plastid	46.27	56.62
Os05t0592800-02	Rice	endoplasmic reticulum, vacuole	46.64	56.18
Zm00001d009747_P001	Maize	cytosol	44.22	56.03
HORVU3Hr1G067380.4	Barley	cytosol	35.07	55.79
KXG22681	Sorghum	cytosol	44.22	55.37
Zm00001d039163_P002	Maize	cytosol	44.22	55.24
HORVU3Hr1G067360.1	Barley	cytosol, peroxisome	5.22	54.9
TraesCS1D01G449700.1	Wheat	cytosol	41.79	54.63
TraesCS1A01G441200.1	Wheat	cytosol	41.79	54.37
OQU87413	Sorghum	cytosol	38.81	54.31
Zm00001d038846_P001	Maize	cytosol, nucleus	37.13	53.78
HORVU3Hr1G050340.1	Barley	plasma membrane, vacuole	47.76	53.67
TraesCS3B01G240000.1	Wheat	peroxisome, plasma membrane, vacuole	47.95	53.65
TraesCS3A01G209200.1	Wheat	peroxisome, plasma membrane, vacuole	47.76	53.44
TraesCS3D01G212100.1	Wheat	peroxisome, plasma membrane, vacuole	47.2	53.15
EES00964	Sorghum	peroxisome, plasma membrane, vacuole	47.76	53.11
GSMUA_Achr8P05700_001	Banana	cytosol, peroxisome, plasma membrane	43.1	52.98
HORVU1Hr1G094840.9	Barley	extracellular, mitochondrion	41.23	52.87
TraesCS1A01G358600.1	Wheat	cytosol	37.13	52.37
KXG22422	Sorghum	cytosol, nucleus, plastid	36.94	52.11
Zm00001d044301_P001	Maize	cytosol, nucleus	47.01	52.07
TraesCS1B01G375100.1	Wheat	cytosol	36.94	51.97
TraesCS1D01G363500.1	Wheat	cytosol	36.94	51.83
TraesCS3D01G249000.1	Wheat	cytosol	36.57	51.72
HORVU1Hr1G080290.6	Barley	cytosol	36.94	51.56
TraesCS3A01G249000.1	Wheat	cytosol	36.75	51.04
Zm00001d011132_P001	Maize	cytosol, nucleus	14.18	51.01
PGSC0003DMT400006608	Potato	plastid	51.68	50.83
TraesCS1B01G475700.1	Wheat	cytosol	41.42	49.89
GSMUA_Achr3P26270_001	Banana	cytosol, peroxisome, plastid	46.08	49.8
TraesCS3B01G277900.1	Wheat	cytosol	36.94	47.48
PGSC0003DMT400094534	Potato	cytosol	17.54	47.0
Os05t0537400-00	Rice	cytosol	25.56	46.28
Zm00001d011131_P001	Maize	cytosol	24.25	46.1
PGSC0003DMT400046382	Potato	cytosol	44.78	44.12
PGSC0003DMT400090149	Potato	cytosol	25.0	40.36
PGSC0003DMT400069947	Potato	cytosol	29.29	37.56
PGSC0003DMT400091100	Potato	cytosol, nucleus, plastid	23.88	37.43
PGSC0003DMT400077989	Potato	cytosol	28.54	37.32
TraesCS7A01G047900.1	Wheat	cytosol, mitochondrion, peroxisome	7.65	36.94
PGSC0003DMT400019552	Potato	cytosol, peroxisome, plastid	7.28	36.45
PGSC0003DMT400043146	Potato	nucleus	27.24	35.61
PGSC0003DMT400050448	Potato	cytosol	25.75	34.67
PGSC0003DMT400023517	Potato	nucleus	25.56	34.34
PGSC0003DMT400078131	Potato	golgi, vacuole	15.3	26.2
PGSC0003DMT400057134	Potato	mitochondrion	11.01	20.21
PGSC0003DMT400049695	Potato	extracellular	2.99	14.55

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102593313	MapMan:11.1.2.1.1.2	MapMan:18.4.24.2.1	Gene3D:3.60.40.10
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1CUZ5	PFAM:PF00481
EnsemblPlantsGene:PGSC0003DMG400029297	PGSC:PGSC0003DMG400029297	EnsemblPlants:PGSC0003DMT400075333	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF374	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0002954A1B	RefSeq:XP_006342498.1	SEG:seg	:	:

Description

Abscisic insensitive 1B [Source:PGSC_GENE;Acc:PGSC0003DMG400029297]

Coordinates

chr12:-:57822209..57825610

Molecular Weight (calculated)

58600.1 Da

IEP (calculated)

4.434

GRAVY (calculated)

-0.226

Length

536 amino acids

Sequence
(BLAST)

001: MEEMYMVAVP FVFGSLICHK PSIGSHMDVT KINSMDDATS LYSNSGTKML ADTVSGGNDD CSSADSESDL SITASSVPEE SRSEGTMSLD VISENESNWI
101: GGDAVVRESE DDDSLSLEGD QIPDNSCSLS VVSDCSSLCA DDFIGFEIAS DIESQDFVDS QKSISHDELI GKTGVLVESD VEDTLTRPVA VPVRLEEQIT
201: DKGLNATVSR SVFEVDYIPL WGYTSICGRR PEMEDAFATV PRFMKIPLQM LIGDRVLDGL SRRLSHLTTH FFGVYDGHGG SQVANYCRDR IHAVLAEELE
301: TFMMNLSDES IKQSCQELWN RAFTNCFLKV DAEIGGGAGH EPVAPETVGS TAVVAVVCSS HIIVANCGDS RAVLCRGKEP MALSVDHKPN REDEYKRIEA
401: AGGKVIQWNG HRVFGVLAMS RSIGDKYLKP WIIPDPEVTF IPRTKDDDCL ILASDGLWDV MTNEEACDMA RKRILMWHKK YGATLPVERG EGIDPASQAA
501: AECLSNRALQ KGSKDNITVI VVDLKAQRKF KTKTST

Best Arabidopsis Sequence Match ( AT1G72770.3 )
(BLAST)

001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T

Arabidopsis Description

HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.