Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
- golgi 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G240000.1 | Wheat | peroxisome, plasma membrane, vacuole | 97.48 | 97.08 |
| TraesCS3A01G209200.1 | Wheat | peroxisome, plasma membrane, vacuole | 97.27 | 96.87 |
| TraesCS3D01G212100.1 | Wheat | peroxisome, plasma membrane, vacuole | 96.65 | 96.85 |
| Os01t0583100-01 | Rice | cytosol | 74.21 | 89.39 |
| Zm00001d011202_P002 | Maize | cytosol, peroxisome, plastid | 76.1 | 82.88 |
| EES00964 | Sorghum | peroxisome, plasma membrane, vacuole | 82.18 | 81.33 |
| Zm00001d044301_P001 | Maize | cytosol, nucleus | 81.55 | 80.37 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 14.88 | 78.89 |
| HORVU7Hr1G029040.1 | Barley | cytosol, peroxisome | 46.33 | 75.43 |
| Solyc08g062640.2.1 | Tomato | cytosol | 20.96 | 74.63 |
| HORVU1Hr1G094840.9 | Barley | extracellular, mitochondrion | 60.38 | 68.9 |
| GSMUA_Achr7P24000_001 | Banana | cytosol | 53.25 | 64.8 |
| GSMUA_Achr8P05700_001 | Banana | cytosol, peroxisome, plasma membrane | 57.02 | 62.39 |
| HORVU3Hr1G067380.4 | Barley | cytosol | 41.51 | 58.75 |
| HORVU3Hr1G067360.1 | Barley | cytosol, peroxisome | 6.08 | 56.86 |
| CDX96761 | Canola | cytosol | 40.88 | 55.71 |
| CDX83901 | Canola | cytosol | 40.88 | 55.71 |
| GSMUA_Achr3P26270_001 | Banana | cytosol, peroxisome, plastid | 57.23 | 55.04 |
| Bra016595.1-P | Field mustard | cytosol | 46.96 | 54.63 |
| HORVU1Hr1G080290.6 | Barley | cytosol | 43.82 | 54.43 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 52.62 | 49.41 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 48.64 | 48.84 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 55.77 | 48.28 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 48.85 | 48.14 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 48.85 | 48.14 |
| CDY26234 | Canola | cytosol | 49.9 | 47.98 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 53.67 | 47.76 |
| KRH61549 | Soybean | cytosol | 53.88 | 47.24 |
| KRH52222 | Soybean | cytosol | 53.67 | 47.06 |
| AT1G17550.1 | Thale cress | cytosol | 50.31 | 46.97 |
| Bra025964.1-P | Field mustard | cytosol | 49.9 | 46.85 |
| CDY48313 | Canola | cytosol | 48.85 | 46.51 |
| AT1G72770.1 | Thale cress | cytosol | 49.48 | 46.18 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 52.41 | 45.62 |
| KRH05300 | Soybean | cytosol | 52.83 | 45.16 |
| PGSC0003DMT400006608 | Potato | plastid | 51.57 | 45.14 |
| KRH15739 | Soybean | cytosol | 52.41 | 44.88 |
| HORVU3Hr1G059170.2 | Barley | cytosol, nucleus | 33.54 | 40.1 |
| HORVU7Hr1G008370.1 | Barley | cytosol, peroxisome | 8.81 | 40.0 |
| HORVU1Hr1G090360.2 | Barley | cytosol, mitochondrion, nucleus | 31.87 | 38.48 |
| Solyc08g062650.2.1 | Tomato | extracellular | 37.32 | 37.95 |
| HORVU3Hr1G085930.3 | Barley | nucleus, plastid | 31.03 | 37.66 |
| HORVU7Hr1G008470.2 | Barley | cytosol | 27.25 | 34.95 |
| HORVU4Hr1G060370.1 | Barley | nucleus | 29.14 | 34.75 |
| HORVU7Hr1G008520.2 | Barley | cytosol | 11.95 | 34.34 |
| HORVU7Hr1G008550.1 | Barley | cytosol | 14.05 | 29.65 |
| HORVU7Hr1G008560.2 | Barley | mitochondrion | 15.09 | 29.63 |
| HORVU2Hr1G000090.2 | Barley | cytosol | 28.09 | 29.52 |
| HORVU7Hr1G093200.5 | Barley | endoplasmic reticulum, plastid | 20.96 | 9.07 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | UniProt:A0A287L0C7 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0043169 | GO:GO:0046872 | EnsemblPlantsGene:HORVU3Hr1G050340 | EnsemblPlants:HORVU3Hr1G050340.1 | InterPro:IPR001932 | InterPro:IPR036457 |
| PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF374 | SMART:SM00332 | SUPFAM:SSF81606 | UniParc:UPI000B46B506 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:360092700..360097903
Molecular Weight (calculated)
49688.9 Da
IEP (calculated)
4.695
GRAVY (calculated)
0.108
Length
477 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVDVAALA VASTPVFSPA TAGLTLIAAA AAEPIAAVVA GAMEGVPVTF SVPPVRTTTD DGLPTGGEGG EASAAGSPCS VTSDCSSVAS ADFEGVGLGF
101: FAAGVEGGAV VFEDSAASAA TVEAEARVAA GGRSVFAVEC VPLWGFTSIC GRRPEMEDAV VAVPRFFGLP LWMLTGNNMV DGLDPISFRL PSHFFGVYDG
201: HGGAQVADYC RDRLHAALVE ELSRIEGSVS GANLGAVEFK KQWEKAFVDC FSRVDDEVAG KVSRGGGGNV GTSSVTGTAM ADPVAPETVG STAVVAVICS
301: SHIIVSNCGD SRAVLCRGKQ PVPLSVDHKP NREDEYARIE AEGGKVIQWN GYRVFGVLAM SRSIGDRYLK PWIIPVPEVT IVPRAKDDEC LILASDGLWD
401: VLSNEEVCDV ARKRILLWHK KNGVNLSSAQ RSGDSPDPAA QAAAECLSKL ALQKGSKDNI TVIVVDLKAQ RKFKSKT
101: FAAGVEGGAV VFEDSAASAA TVEAEARVAA GGRSVFAVEC VPLWGFTSIC GRRPEMEDAV VAVPRFFGLP LWMLTGNNMV DGLDPISFRL PSHFFGVYDG
201: HGGAQVADYC RDRLHAALVE ELSRIEGSVS GANLGAVEFK KQWEKAFVDC FSRVDDEVAG KVSRGGGGNV GTSSVTGTAM ADPVAPETVG STAVVAVICS
301: SHIIVSNCGD SRAVLCRGKQ PVPLSVDHKP NREDEYARIE AEGGKVIQWN GYRVFGVLAM SRSIGDRYLK PWIIPVPEVT IVPRAKDDEC LILASDGLWD
401: VLSNEEVCDV ARKRILLWHK KNGVNLSSAQ RSGDSPDPAA QAAAECLSKL ALQKGSKDNI TVIVVDLKAQ RKFKSKT
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.