Factsheet for HORVU4Hr1G002870.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G028520.1
HORVU1Hr1G041770.1
HORVU1Hr1G070360.1
HORVU2Hr1G086930.1
HORVU2Hr1G089660.8
HORVU2Hr1G089670.1
HORVU3Hr1G018940.2
HORVU3Hr1G066410.6
HORVU3Hr1G081710.1
HORVU3Hr1G088130.1
HORVU4Hr1G024530.1
HORVU4Hr1G078490.1
HORVU5Hr1G024100.1
HORVU5Hr1G047520.1
HORVU6Hr1G058890.2
HORVU7Hr1G021880.1
HORVU7Hr1G101270.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30880.1	HORVU1Hr1G028520.1	AT1G55190.1	21798944
AT2G30880.1	HORVU3Hr1G018940.2	AT1G55190.1	21798944
AT2G30880.1	HORVU3Hr1G066410.6	AT4G00980.1	21798944
AT2G30880.1	HORVU1Hr1G041770.1	AT4G30080.1	21798944
AT2G30880.1	HORVU2Hr1G089660.8	AT4G30080.1	21798944
AT2G30880.1	HORVU2Hr1G089670.1	AT4G30080.1	21798944
AT2G30880.1	HORVU3Hr1G081710.1	AT4G30080.1	21798944
AT2G30880.1	HORVU4Hr1G078490.1	AT4G30080.1	21798944
AT2G30880.1	HORVU5Hr1G024100.1	AT4G30080.1	21798944
AT2G30880.1	HORVU6Hr1G058890.2	AT4G30080.1	21798944
AT2G30880.1	HORVU7Hr1G021880.1	AT4G30080.1	21798944
AT2G30880.1	HORVU7Hr1G101270.1	AT4G30080.1	21798944
AT2G30880.1	HORVU1Hr1G070360.1	AT5G01640.1	21798944
AT2G30880.1	HORVU2Hr1G086930.1	AT5G01640.1	21798944
AT2G30880.1	HORVU3Hr1G088130.1	AT5G01640.1	21798944
AT2G30880.1	HORVU4Hr1G024530.1	AT5G01640.1	21798944
AT2G30880.1	HORVU5Hr1G047520.1	AT5G01640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G294800.1	Wheat	cytosol, plastid	97.5	85.8
TraesCS4D01G017000.2	Wheat	cytosol, plastid	97.27	85.6
TraesCS4B01G018800.2	Wheat	cytosol, plastid	96.59	79.14
KXG37877	Sorghum	cytosol	89.77	79.0
Os03t0666200-01	Rice	plasma membrane	89.09	78.4
Zm00001d013589_P006	Maize	cytosol, plastid	88.64	78.0
Os12t0505950-00	Rice	cytosol	13.41	73.75
Os05t0128700-00	Rice	cytosol	13.41	73.75
Os05t0153901-00	Rice	cytosol	12.73	70.0
Zm00001d034954_P001	Maize	extracellular	88.18	67.71
GSMUA_Achr5P02150_001	Banana	cytosol, plastid	69.77	61.65
Solyc05g021100.2.1	Tomato	cytosol, nucleus, plastid	60.91	61.05
VIT_12s0028g00830.t01	Wine grape	cytosol	67.95	59.8
GSMUA_Achr9P10020_001	Banana	cytosol	66.59	59.19
KRH73621	Soybean	endoplasmic reticulum	65.0	58.37
KRH14510	Soybean	cytosol	64.32	57.76
HORVU2Hr1G060900.13	Barley	plastid	58.86	52.64
CDX97786	Canola	cytosol, plastid	59.55	52.3
CDY29635	Canola	cytosol, plastid	59.32	51.89
Bra021674.1-P	Field mustard	cytosol	59.32	51.89
AT2G30880.1	Thale cress	cytosol, plastid	59.09	51.59
Bra022817.1-P	Field mustard	cytosol	32.05	50.54
CDY23978	Canola	cytosol	45.45	42.92
Zm00001d033157_P001	Maize	mitochondrion	9.09	25.48

Protein Annotations

EnsemblPlants:HORVU4Hr1G002870.1	EnsemblPlantsGene:HORVU4Hr1G002870	Gene3D:2.30.29.30	InterPro:IPR011993	InterPro:PH-like_dom_sf	ncoils:Coil
PANTHER:PTHR24356	PANTHER:PTHR24356:SF215	SEG:seg	SUPFAM:SSF50729	UniParc:UPI000B4880C1	UniProt:A0A287MXU9
MapMan:27.4.3.3	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:5425052..5429404

Molecular Weight (calculated)

47694.1 Da

IEP (calculated)

4.610

GRAVY (calculated)

-0.398

Length

440 amino acids

Sequence
(BLAST)

001: MEYKLRRNET AVKGAILFDA SSTITLSPVN FHGMPKYDGC CFYIGTPQKK DYFLCAETPG AAKAWVSTLH ATQLVLQAHK EAVNSLAGNG SPSTLGTVAT
101: AVANANATAL EAMKEIDAAL KVSMRAALGL GTNNSNAGQL DDLTIMKETL RVKDEELQHL AKDIRARDAT IQEIADKLTE TAEAAEAAAS AAHTIDEQRR
201: LLCSEIERLK KAMETQMEQS MLKLRQSEEK VISLSKENDQ LLKERDAAFQ EAYMWRTELG KAREQAVIQE AAIARAEEKV RVTEADATVR IKEAVENLHA
301: AEKEKEELLA LIGVLQSQVQ REQSSTKQVC EERSESCSGA DNSPPLTKHV DASDDDVDKA CVSDSRSVLV SSESTEVQLA VDGVDIRPIG DPVWGGFQQS
401: EALIADVREV SPEAEGSSLD IPVVNPPPAN DHMQGGATHP

Best Arabidopsis Sequence Match ( AT2G30880.1 )
(BLAST)

001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP

Arabidopsis Description

At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.