Factsheet for HORVU7Hr1G101270.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G017770.6
HORVU1Hr1G028170.4
HORVU1Hr1G035720.2
HORVU1Hr1G041770.1
HORVU2Hr1G010630.1
HORVU2Hr1G010670.1
HORVU2Hr1G010690.1
HORVU2Hr1G089660.8
HORVU2Hr1G089670.1
HORVU2Hr1G109650.18
HORVU3Hr1G019750.4
HORVU3Hr1G032230.6
HORVU3Hr1G070620.5
HORVU3Hr1G081710.1
HORVU4Hr1G078490.1
HORVU5Hr1G024100.1
HORVU5Hr1G033540.2
HORVU5Hr1G038630.1
HORVU5Hr1G050990.4
HORVU5Hr1G051010.2
HORVU6Hr1G058890.2
HORVU7Hr1G021880.1
HORVU7Hr1G048050.2
HORVU7Hr1G101270.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G28350.1	HORVU2Hr1G109650.18	AT1G19850.1	22096563
AT2G28350.1	HORVU3Hr1G032230.6	AT1G34310.1	22096563
AT2G28350.1	HORVU1Hr1G041770.1	AT2G28350.1	22096563
AT2G28350.1	HORVU2Hr1G089660.8	AT2G28350.1	22096563
AT2G28350.1	HORVU2Hr1G089670.1	AT2G28350.1	22096563
AT2G28350.1	HORVU3Hr1G081710.1	AT2G28350.1	22096563
AT2G28350.1	HORVU4Hr1G078490.1	AT2G28350.1	22096563
AT2G28350.1	HORVU5Hr1G024100.1	AT2G28350.1	22096563
AT2G28350.1	HORVU6Hr1G058890.2	AT2G28350.1	22096563
AT2G28350.1	HORVU7Hr1G021880.1	AT2G28350.1	22096563
AT2G28350.1	HORVU7Hr1G101270.1	AT2G28350.1	22096563
AT2G28350.1	HORVU1Hr1G028170.4	AT3G16500.1	21734647
AT2G28350.1	HORVU3Hr1G019750.4	AT3G16500.1	21734647
AT2G28350.1	HORVU3Hr1G070620.5	AT3G16500.1	21734647
AT2G28350.1	HORVU3Hr1G032230.6	AT3G61830.1	22096563
AT2G28350.1	HORVU1Hr1G028170.4	AT5G25890.1	22096563
AT2G28350.1	HORVU3Hr1G019750.4	AT5G25890.1	22096563
AT2G28350.1	HORVU3Hr1G070620.5	AT5G25890.1	22096563
AT4G30080.1	HORVU1Hr1G017770.6	AT3G17600.1	21798944
AT4G30080.1	HORVU1Hr1G035720.2	AT5G38420.1	21798944
AT4G30080.1	HORVU2Hr1G010630.1	AT5G38420.1	21798944
AT4G30080.1	HORVU2Hr1G010670.1	AT5G38420.1	21798944
AT4G30080.1	HORVU2Hr1G010690.1	AT5G38420.1	21798944
AT4G30080.1	HORVU5Hr1G033540.2	AT5G38420.1	21798944
AT4G30080.1	HORVU5Hr1G038630.1	AT5G38420.1	21798944
AT4G30080.1	HORVU5Hr1G050990.4	AT5G38420.1	21798944
AT4G30080.1	HORVU5Hr1G051010.2	AT5G38420.1	21798944
AT4G30080.1	HORVU7Hr1G048050.2	AT5G38420.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G436800.1	Wheat	nucleus	95.98	96.26
TraesCS7B01G346700.1	Wheat	nucleus	95.55	95.97
TraesCS7A01G446900.1	Wheat	nucleus	96.13	95.58
HORVU6Hr1G026750.1	Barley	cytosol, nucleus, plastid	26.26	94.33
Os06t0685700-01	Rice	nucleus	83.5	83.14
EER88840	Sorghum	nucleus	82.07	80.68
Zm00001d014507_P002	Maize	nucleus	80.06	76.97
Zm00001d000358_P001	Maize	nucleus	74.75	74.43
GSMUA_Achr4P18240_001	Banana	nucleus	60.69	69.69
GSMUA_Achr8P18930_001	Banana	nucleus	54.95	66.84
GSMUA_Achr5P18540_001	Banana	nucleus	49.64	66.67
GSMUA_Achr11P...	Banana	nucleus	51.51	66.36
GSMUA_Achr5P03960_001	Banana	nucleus	51.79	64.58
GSMUA_Achr11P...	Banana	nucleus	55.95	64.57
GSMUA_Achr5P14630_001	Banana	nucleus	50.65	64.07
HORVU4Hr1G078490.1	Barley	cytosol, nucleus, plastid	10.19	63.39
VIT_06s0004g02750.t01	Wine grape	nucleus	63.85	62.59
HORVU3Hr1G081710.1	Barley	cytosol	9.33	61.9
VIT_08s0040g01810.t01	Wine grape	nucleus	55.24	61.8
Solyc09g007810.2.1	Tomato	nucleus	61.12	61.38
HORVU5Hr1G024100.1	Barley	cytosol	13.2	60.93
HORVU1Hr1G041770.1	Barley	nucleus	60.11	60.9
PGSC0003DMT400055522	Potato	nucleus	59.97	60.4
VIT_13s0019g04380.t01	Wine grape	nucleus	58.82	60.38
KRH22880	Soybean	nucleus	57.25	59.55
KRH26435	Soybean	nucleus	59.54	59.29
CDY43553	Canola	nucleus	51.94	59.25
KRH25023	Soybean	nucleus	59.54	59.2
Solyc11g069500.1.1	Tomato	nucleus	58.97	58.8
PGSC0003DMT400020874	Potato	nucleus	58.82	58.66
KRH29907	Soybean	nucleus	58.54	58.54
CDX68620	Canola	nucleus	51.65	58.35
KRH32480	Soybean	nucleus	58.39	58.14
Bra011162.1-P	Field mustard	nucleus	53.37	57.5
AT4G30080.1	Thale cress	nucleus	54.81	57.01
KRG95987	Soybean	nucleus	57.1	56.86
CDY15734	Canola	nucleus	54.66	56.03
CDY04557	Canola	nucleus	54.95	55.91
Bra011955.1-P	Field mustard	nucleus	55.95	55.32
KRG91907	Soybean	nucleus	46.48	54.64
AT2G28350.1	Thale cress	nucleus	54.23	54.55
PGSC0003DMT400062489	Potato	nucleus	52.8	54.44
KRH34867	Soybean	nucleus	47.78	54.41
Solyc06g075150.2.1	Tomato	nucleus	51.94	53.95
HORVU6Hr1G058890.2	Barley	mitochondrion	57.68	52.96
HORVU2Hr1G089670.1	Barley	nucleus	53.08	52.11
Bra024109.1-P	Field mustard	nucleus	50.36	50.58
Solyc10g086130.1.1	Tomato	nucleus	42.9	47.39
CDY46728	Canola	nucleus	53.95	44.55
HORVU4Hr1G031990.1	Barley	cytosol	4.59	42.67
CDY30172	Canola	nucleus	50.65	42.53
HORVU4Hr1G080510.1	Barley	cytosol	6.6	41.44
HORVU5Hr1G054640.1	Barley	cytosol	6.46	40.54
HORVU7Hr1G021880.1	Barley	nucleus	12.05	38.01
HORVU6Hr1G070410.1	Barley	cytosol	5.31	37.76
HORVU1Hr1G049680.1	Barley	cytosol	5.02	32.71
HORVU7Hr1G108360.1	Barley	nucleus	14.49	29.88
HORVU2Hr1G089660.8	Barley	nucleus	12.63	27.08
HORVU1Hr1G076690.6	Barley	nucleus	24.68	24.68
HORVU3Hr1G072340.2	Barley	nucleus	23.53	24.19
HORVU1Hr1G087460.6	Barley	mitochondrion, nucleus	25.39	20.7
HORVU2Hr1G125740.1	Barley	nucleus	10.9	19.54

Protein Annotations

MapMan:15.5.5.1	Gene3D:2.30.30.1040	Gene3D:2.40.330.10	Gene3D:3.10.20.90	UniProt:A0A287XLS5	InterPro:Auxin_resp
InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G101270
EnsemblPlants:HORVU7Hr1G101270.1	InterPro:IPR000270	InterPro:IPR003340	InterPro:IPR015300	InterPro:PB1_dom	PFAM:PF02362
PFAM:PF06507	PFscan:PS50863	PFscan:PS51745	PANTHER:PTHR31384	PANTHER:PTHR31384:SF27	SMART:SM01019
SUPFAM:SSF101936	UniParc:UPI000B4883AE	SEG:seg	:	:	:

Description

Auxin response factor [Source:UniProtKB/TrEMBL;Acc:A0A287XLS5]

Coordinates

chrchr7H:-:608259620..608263939

Molecular Weight (calculated)

75642.1 Da

IEP (calculated)

7.845

GRAVY (calculated)

-0.314

Length

697 amino acids

Sequence
(BLAST)

001: MITFVDSAAG ERERGDGPRC LDPQLWHACA GGMVQMPPVG CRVYYFPQGH AEHAQGQAAA VDFPPGARLQ ALVLCRVAAV RFMADPDTDE VFAKIRLVPA
101: RPQDAADADD AIAAAAAGQE DKPASFAKTL TQSDANNGGG FSVPRYCAET IFPRLDYSAD PPVQTVLAKD VHGVVWKFRH IYRGTPRRHL LTTGWSSFVN
201: QKKLVAGDSI VFMRTENGDL CVGIRRAKKG GIGGPELLPP PSPAASGNYG GFSMFLRGEE DGSNKMMGAR GKARVRVRPE EVAEAANLAV SGQPFDVLYY
301: PRASTPEFCV RAAAVRASMR TQWCPGMRFK MAFETEDSSR ISWFMGTVSV VQVADPIRWP NSPWRLLQVT WDEPDLLQNV KRVSPWLVEL VSNMPAIHLA
401: PFSPPRKKLC VPFYPDLPVD GQFPSPMFHG NPLGRGGGGG PMCYFPDGTP AGIQGARHAQ FGISLSDLHL NKLQSSLSPH GLHQVDHGGQ PRIAAGLIIG
501: HQSARDDISC MLTIGNHQNN NNSDVKKASP QLMLFGKPIL TEQQITLGNS RGFSPSAARK STSDMSAEKS ANNSDIPSPQ SNQNGSMKNL SCGRVPLCQD
601: NKVLDLGLDI GHCKIFMQSE DVGRTLDLTA VGSYEELYRR LSDMFGMEKA ELMSHVFYRD AAGALKHTGD EPFSDFTKTA RRLTILTDTS GDSSVAS

Best Arabidopsis Sequence Match ( AT4G30080.1 )
(BLAST)

001: MINVMNPMKG GTEKGLDPQL WHACAGGMVR MPPMNSKVFY FPQGHAENAY DCVDFGNLPI PPMVLCRVLA IKYMADAESD EVFAKLRLIP LKDDEYVDHE
101: YGDGEDSNGF ESNSEKTPSF AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YNAEPPVQTI LAKDVHGDVW KFRHIYRGTP RRHLLTTGWS NFVNQKKLVA
201: GDSIVFMRAE NGDLCVGIRR AKRGGIGNGP EYSAGWNPIG GSCGYSSLLR EDESNSLRRS NCSLADRKGK VTAESVIEAA TLAISGRPFE VVYYPRASTS
301: EFCVKALDAR AAMRIPWCSG MRFKMAFETE DSSRISWFMG TVSAVNVSDP IRWPNSPWRL LQVAWDEPDL LQNVKRVNPW LVELVSNVHP IPLTSFSPPR
401: KKMRLPQHPD YNNLINSIPV PSFPSNPLIR SSPLSSVLDN VPVGLQGARH NAHQYYGLSS SDLHHYYLNR PPPPPPPSSL QLSPSLGLRN IDTKNEKGFC
501: FLTMGTTPCN DTKSKKSHIV LFGKLILPEE QLSEKGSTDT ANIEKTQISS GGSNQNGVAG REFSSSDEGS PCSKKVHDAS GLETGHCKVF MESDDVGRTL
601: DLSVLGSYEE LSRKLSDMFG IKKSEMLSSV LYRDASGAIK YAGNEPFSEF LKTARRLTIL TEQGSESVVV

Arabidopsis Description

ARF16Auxin response factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q93YR9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.