Factsheet for HORVU6Hr1G026750.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G101270.1	Barley	nucleus	94.33	26.26
PGSC0003DMT400045323	Potato	cytosol	34.02	24.63
HORVU1Hr1G041770.1	Barley	nucleus	45.88	12.94
HORVU6Hr1G058890.2	Barley	mitochondrion	42.27	10.8
HORVU2Hr1G089670.1	Barley	nucleus	36.08	9.86
Solyc11g013470.1.1	Tomato	cytosol, nucleus, vacuole	16.49	9.44
HORVU2Hr1G125740.1	Barley	nucleus	13.4	6.68
HORVU1Hr1G076690.6	Barley	nucleus	12.37	3.44
HORVU3Hr1G072340.2	Barley	nucleus	11.34	3.24
HORVU1Hr1G087460.6	Barley	mitochondrion, nucleus	13.92	3.16
HORVU4Hr1G078490.1	Barley	cytosol, nucleus, plastid	1.55	2.68
HORVU5Hr1G024100.1	Barley	cytosol	2.06	2.65
HORVU7Hr1G108360.1	Barley	nucleus	3.61	2.07
HORVU2Hr1G089660.8	Barley	nucleus	2.58	1.54
HORVU3Hr1G081710.1	Barley	cytosol	0.52	0.95
HORVU1Hr1G049680.1	Barley	cytosol	0.52	0.93
HORVU7Hr1G021880.1	Barley	nucleus	1.03	0.9
Zm00001d003011_P001	Maize	nucleus	0.0	0.0
HORVU6Hr1G070410.1	Barley	cytosol	0.0	0.0
HORVU5Hr1G054640.1	Barley	cytosol	0.0	0.0
HORVU4Hr1G080510.1	Barley	cytosol	0.0	0.0
HORVU4Hr1G031990.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G026750.1	EnsemblPlantsGene:HORVU6Hr1G026750	PANTHER:PTHR31384	PANTHER:PTHR31384:SF27	SEG:seg	UniParc:UPI000B4610DD
UniProt:A0A287TNJ0	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:103219943..103221199

Molecular Weight (calculated)

20792.1 Da

IEP (calculated)

10.414

GRAVY (calculated)

-0.334

Length

194 amino acids

Sequence
(BLAST)

001: MPAIHLAPFS PPRKKLCVPF YPDLPVDGQF PSPMFHGNPL GRGGGGGPMC YFPDGTPAGI QGARHAQFGI SLSDLHLNKL QSSLSPHGLH QVDHGGQPRI
101: AAGLIIGHQS ARDDISCMLT IGNHQNNNNS DVKKASPQLM LFGKPILTEQ QITLGNSRGF SPSAARKSTS DMSDRKVGRI TLIFQAHKAT RMAL

Best Arabidopsis Sequence Match ( AT2G28350.1 )
(BLAST)

001: MEQEKSLDPQ LWHACAGSMV QIPSLNSTVF YFAQGHTEHA HAPPDFHAPR VPPLILCRVV SVKFLADAET DEVFAKITLL PLPGNDLDLE NDAVLGLTPP
101: SSDGNGNGKE KPASFAKTLT QSDANNGGGF SVPRYCAETI FPRLDYSAEP PVQTVIAKDI HGETWKFRHI YRGTPRRHLL TTGWSTFVNQ KKLIAGDSIV
201: FLRSESGDLC VGIRRAKRGG LGSNAGSDNP YPGFSGFLRD DESTTTTSKL MMMKRNGNND GNAAATGRVR VEAVAEAVAR AACGQAFEVV YYPRASTPEF
301: CVKAADVRSA MRIRWCSGMR FKMAFETEDS SRISWFMGTV SAVQVADPIR WPNSPWRLLQ VAWDEPDLLQ NVKRVSPWLV ELVSNMPTIH LSPFSPRKKI
401: RIPQPFEFPF HGTKFPIFSP GFANNGGGES MCYLSNDNNN APAGIQGARQ AQQLFGSPSP SLLSDLNLSS YTGNNKLHSP AMFLSSFNPR HHHYQARDSE
501: NSNNISCSLT MGNPAMVQDK KKSVGSVKTH QFVLFGQPIL TEQQVMNRKR FLEEEAEAEE EKGLVARGLT WNYSLQGLET GHCKVFMESE DVGRTLDLSV
601: IGSYQELYRK LAEMFHIEER SDLLTHVVYR DANGVIKRIG DEPFSDFMKA TKRLTIKMDI GGDNVRKTWI TGIRTGENGI DASTKTGPLS IFA

Arabidopsis Description

ARF10Auxin response factor (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV66]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.