Factsheet for HORVU2Hr1G125740.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G577800.1	Wheat	nucleus	62.98	47.76
TraesCS2A01G567300.1	Wheat	nucleus	62.98	47.57
EES13156	Sorghum	nucleus	34.96	26.25
Zm00001d002929_P001	Maize	nucleus	33.42	25.34
Os04t0690600-01	Rice	plastid	33.68	24.76
VIT_18s0001g04180.t01	Wine grape	mitochondrion, nucleus	19.54	21.9
Zm00001d026687_P001	Maize	nucleus	24.94	21.0
Zm00001d030801_P001	Maize	nucleus	22.88	19.96
KRH16623	Soybean	nucleus	17.74	17.88
ATMG00940.1	Thale cress	cytosol	7.46	17.68
GSMUA_Achr6P18900_001	Banana	plastid	17.99	17.03
GSMUA_Achr9P29480_001	Banana	nucleus	16.97	14.73
Zm00001d030803_P001	Maize	nucleus	12.85	14.71
CDX68039	Canola	nucleus	19.54	13.95
Bra003665.1-P	Field mustard	nucleus	19.54	13.92
CDX79239	Canola	nucleus	19.28	13.79
CDX88392	Canola	nucleus	18.51	13.58
HORVU6Hr1G026750.1	Barley	cytosol, nucleus, plastid	6.68	13.4
Bra015651.1-P	Field mustard	nucleus	18.77	13.37
HORVU2Hr1G089660.8	Barley	nucleus	11.05	13.23
HORVU7Hr1G108360.1	Barley	nucleus	11.05	12.72
KRH64757	Soybean	plastid	18.25	12.63
KRH18828	Soybean	nucleus	17.74	12.52
AT1G77850.2	Thale cress	nucleus	17.48	11.41
HORVU7Hr1G101270.1	Barley	nucleus	19.54	10.9
HORVU1Hr1G041770.1	Barley	nucleus	18.77	10.61
GSMUA_Achr10P...	Banana	nucleus	13.37	10.4
Zm00001d026694_P001	Maize	nucleus	9.77	10.38
HORVU2Hr1G089670.1	Barley	nucleus	18.51	10.14
Solyc11g013480.1.1	Tomato	nucleus	8.48	9.65
HORVU6Hr1G058890.2	Barley	mitochondrion	18.25	9.35
PGSC0003DMT400071449	Potato	nucleus	8.48	9.14
HORVU3Hr1G072340.2	Barley	nucleus	9.77	5.6
HORVU1Hr1G076690.6	Barley	nucleus	9.51	5.31
HORVU1Hr1G087460.6	Barley	mitochondrion, nucleus	10.54	4.8
HORVU6Hr1G070410.1	Barley	cytosol	0.77	3.06
HORVU4Hr1G080510.1	Barley	cytosol	0.77	2.7
HORVU5Hr1G054640.1	Barley	cytosol	0.77	2.7
HORVU4Hr1G078490.1	Barley	cytosol, nucleus, plastid	0.51	1.79
HORVU5Hr1G024100.1	Barley	cytosol	0.51	1.32
HORVU1Hr1G049680.1	Barley	cytosol	0.26	0.93
KRH16622	Soybean	mitochondrion	0.0	0.0
HORVU7Hr1G021880.1	Barley	nucleus	0.0	0.0
HORVU4Hr1G031990.1	Barley	cytosol	0.0	0.0
HORVU3Hr1G081710.1	Barley	cytosol	0.0	0.0

Protein Annotations

MapMan:35.1	UniProt:A0A287JT99	InterPro:Auxin_resp	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009725	GO:GO:0009734	GO:GO:0009987
EnsemblPlantsGene:HORVU2Hr1G125740	EnsemblPlants:HORVU2Hr1G125740.1	PFAM:PF06507	PANTHER:PTHR31384	PANTHER:PTHR31384:SF19	UniParc:UPI000B47EFEE
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:761528681..761532768

Molecular Weight (calculated)

30965.3 Da

IEP (calculated)

4.655

GRAVY (calculated)

-0.289

Length

389 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: ARVPPQEVDD AVRLAAEGAP FTVTYYPRQG AGEFVVPKQE VEEALVGAWR PGVQVRMKFL DAEERRSEWI NGVVKAVDPN IWRMLEINWA ESVAGSLNRY
201: VNAWQVEHVG HPPILKKLKI SEVHHPLCSV DVGMADQLLG TDCQNMVMLM GSPIPAGMQG ARHIALTELP SPSPSPTELT TKQFFPPSSS GGSSEVVNPD
301: TGSGSGSPPN NSVNMRPSEE RRSIQLFGAT IMSPVQSATN GSSEEVSQAP DAVVDGTAHE DASATSLLDS HLTVGKDDGH DRNGSEPQA

Best Arabidopsis Sequence Match ( AT1G77850.2 )
(BLAST)

001: MSPPSATAGD INHREVDPTI WRACAGASVQ IPVLHSRVYY FPQGHVEHCC PLLSTLPSST SPVPCIITSI QLLADPVTDE VFAHLILQPM TQQQFTPTNY
101: SRFGRFDGDV DDNNKVTTFA KILTPSDANN GGGFSVPRFC ADSVFPLLNF QIDPPVQKLY VTDIHGAVWD FRHIYRGTPR RHLLTTGWSK FVNSKKLIAG
201: DSVVFMRKSA DEMFIGVRRT PISSSDGGSS YYGGDEYNGY YSQSSVAKED DGSPKKTFRR SGNGKLTAEA VTDAINRASQ GLPFEVVFYP AAGWSEFVVR
301: AEDVESSMSM YWTPGTRVKM AMETEDSSRI TWFQGIVSST YQETGPWRGS PWKQLQITWD EPEILQNVKR VNPWQVEIAA HATQLHTPFP PAKRLKYPQP
401: GGGFLSGDDG EILYPQSGLS SAAAPDPSPS MFSYSTFPAG MQGARQYDFG SFNPTGFIGG NPPQLFTNNF LSPLPDLGKV STEMMNFGSP PSDNLSPNSN
501: TTNLSSGNDL VGNRGPLSKK VNSIQLFGKI ITVEEHSESG PAESGLCEED GSKESSDNET QLSLSHAPPS VPKHSNSNAG SSSQGIFRSL SSTIIN

Arabidopsis Description

ARF17auxin response factor 17 [Source:TAIR;Acc:AT1G77850]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.